RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CREB3L4Q8TEY5 395 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 MSLNLQ96KJ4 702 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 TMEM121BQ9BXQ6 578 aaPredicted RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 ABCG4Q9H172 646 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 EPS8L2Q9H6S3 715 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 PADI2Q9Y2J8 665 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 MAP4K5Q9Y4K4 846 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 PRAMEF33A0A0G2JMD5 474 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 B4GAT1O43505 415 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 PRICKLE3O43900 615 aaPredicted RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 CLEC3AO75596 197 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 KRT75O95678 551 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 IGFBP5P24593 272 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 POLR2IP36954 125 aaKnown RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 PRIM2P49643 509 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 DAPP51397 102 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 ESRRGP62508 458 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 SCARB2Q14108 478 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 ZBED5Q49AG3 693 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 KDM4DQ6B0I6 523 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 USP30Q70CQ3 517 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 ADCK2Q7Z695 626 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 FAM124AQ86V42 546 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 NUDT13Q86X67 352 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 RAD21L1Q9H4I0 556 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 CXorf36Q9H7Y0 433 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 VCX3AQ9NNX9 186 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 SLAMF7Q9NQ25 335 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 SCHIP1Q9P0W5 487 aaPredicted RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 RSL24D1Q9UHA3 163 aaKnown RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 ADAM29Q9UKF5 820 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 SAMHD1Q9Y3Z3 626 aaKnown RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 PRSS38A1L453 326 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 SCAMP1O15126 338 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 TMPRSS11DO60235 418 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 MITFO75030 526 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 HOXC4P09017 264 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 ITGAMP11215 1152 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 UQCRC2P22695 453 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 SOAT1P35610 550 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 CDK9P50750 372 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 RBM48Q5RL73 367 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 CCDC80Q76M96 950 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 GPR141Q7Z602 305 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 NATD1Q8N6N6 113 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 CHDHQ8NE62 594 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 PIK3C3Q8NEB9 887 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 NFKBIDQ8NI38 313 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 HDAC2Q92769 488 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 DDX31Q9H8H2 851 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 SNRNP200O75643 2136 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 TRBC2A0A5B9 178 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 CRHBPP24387 322 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 SLC5A2P31639 672 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 GSTM5P46439 218 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 SH3BGRP55822 239 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 ISL1P61371 349 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 ELOAQ14241 798 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 ZNF630Q2M218 657 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 CTU2Q2VPK5 515 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 COL13A1Q5TAT6 717 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 ZNF691Q5VV52 312 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 TSEN54Q7Z6J9 526 aaKnown RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 FAM20CQ8IXL6 584 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 MRGPRX1Q96LB2 322 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 AICDAQ9GZX7 198 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 REEP1Q9H902 201 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 PDP1Q9P0J1 537 aaPredicted RBP19.17■□□□□ 0.66
USP39-204ENST00000409766 NCKAP1Q9Y2A7 1128 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 PIAS3Q9Y6X2 628 aa19.17■□□□□ 0.66
USP39-204ENST00000409766 LRIT2A6NDA9 550 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 FRKP42685 505 aaPredicted RBP19.16■□□□□ 0.66
USP39-204ENST00000409766 ALDH9A1P49189 494 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 TPD52P55327 224 aaPredicted RBP19.16■□□□□ 0.66
USP39-204ENST00000409766 CLDN2P57739 230 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 KIAA1024LP59773 190 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 CDK6Q00534 326 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 CD47Q08722 323 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 IL18R1Q13478 541 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 C6orf141Q5SZD1 244 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 ZNF773Q6PK81 442 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 TTLQ8NG68 377 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 OR5P2Q8WZ92 322 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 TAMM41Q96BW9 452 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 ZNF764Q96H86 408 aaPredicted RBP19.16■□□□□ 0.66
USP39-204ENST00000409766 OR2M4Q96R27 311 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 NLNQ9BYT8 704 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 MRPS30Q9NP92 439 aaKnown RBP19.16■□□□□ 0.66
USP39-204ENST00000409766 CD93Q9NPY3 652 aa19.16■□□□□ 0.66
USP39-204ENST00000409766 PDPK1O15530 556 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 IL7RP16871 459 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 DRD1P21728 446 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 PCBP4P57723 403 aaKnown RBP19.15■□□□□ 0.66
USP39-204ENST00000409766 PMS2P3Q13401 168 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 MEP1AQ16819 746 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 OR4C11Q6IEV9 310 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 KCTD8Q6ZWB6 473 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 GALNT5Q7Z7M9 940 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 TDHQ8IZJ6 230 aa19.15■□□□□ 0.66
USP39-204ENST00000409766 AMER3Q8N944 861 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms