RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 HSF5Q4G112 596 aaPredicted RBP10.89□□□□□ -0.67
SNX13-202ENST00000409604 TMEM52BQ4KMG9 183 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 OR5M10Q6IEU7 315 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 UNC5DQ6UXZ4 953 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 ADHFE1Q8IWW8 467 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 LSMEM2Q8N112 164 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 ARL14Q8N4G2 192 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 DHRSXQ8N5I4 330 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 CATSPER1Q8NEC5 780 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 OR5K2Q8NHB8 316 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 ART5Q96L15 291 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 KCNC2Q96PR1 638 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 RPS6KA6Q9UK32 745 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 H0YGG7 62 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 HAT1O14929 419 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 TAPBPO15533 448 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 PRMT3O60678 531 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 JRKO75564 520 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 OPN1LWP04000 364 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 GABRA3P34903 492 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 ARF3P61204 181 aaPredicted RBP10.89□□□□□ -0.67
SNX13-202ENST00000409604 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 TUBB3Q13509 450 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 CLEC12AQ5QGZ9 265 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 CHMP1BQ7LBR1 199 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 MMP21Q8N119 569 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 CBR4Q8N4T8 237 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 OR5T3Q8NGG3 340 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 MIEF2Q96C03 454 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NRBF2Q96F24 287 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 COQ10AQ96MF6 247 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 C5orf34Q96MH7 638 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 C1QTNF1Q9BXJ1 281 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 DGCR6LQ9BY27 220 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 REEP4Q9H6H4 257 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NLGN3Q9NZ94 848 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 RIMKLBQ9ULI2 386 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 SNX11Q9Y5W9 270 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 HTTP42858 3142 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 FRS3O43559 492 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SCO2O43819 266 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 GREM1O60565 184 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SNUPNO95149 360 aaKnown RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 RPS17P08708 135 aaKnown RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 DHRS4L1P0CG22 281 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 XCR1P46094 333 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SCARB2Q14108 478 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 GPR19Q15760 415 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 C5orf22Q49AR2 442 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 ZNF730Q6ZMV8 503 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 ACOT4Q8N9L9 421 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 PHOSPHO1Q8TCT1 267 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 MZB1Q8WU39 189 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 ZDHHC5Q9C0B5 715 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 WSB2Q9NYS7 404 aaPredicted RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 TRPS1Q9UHF7 1281 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 CDC14AQ9UNH5 594 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 RNF215Q9Y6U7 377 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 NINQ8N4C6 2090 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 FAM227AF5H4B4 570 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 MAN1A2O60476 641 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SNNO75324 88 aaPredicted RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 KIR2DL1P43626 348 aaPredicted RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 OR4C11Q6IEV9 310 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 CASP12Q6UXS9 341 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 NET1Q7Z628 596 aaPredicted RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 OR5D16Q8NGK9 328 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 P2RY12Q9H244 342 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 RAD21L1Q9H4I0 556 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SOX17Q9H6I2 414 aaPredicted RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 EBF1Q9UH73 591 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 PTBP2Q9UKA9 531 aaKnown RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 USP22Q9UPT9 525 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 OR7A17O14581 309 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 TRAPPC6AO75865 159 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 UGT2B7P16662 529 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 MTTPP55157 894 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 LSM3P62310 102 aaKnown RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 LRP8Q14114 963 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SMAD2Q15796 467 aaKnown RBP10.88□□□□□ -0.67
SNX13-202ENST00000409604 SYT16Q17RD7 645 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 INAVAQ3KP66 663 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 USP30Q70CQ3 517 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 SYT13Q7L8C5 426 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 ZDHHC21Q8IVQ6 265 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 ECHDC3Q96DC8 303 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 TRAPPC9Q96Q05 1148 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 TBL1XR1Q9BZK7 514 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 UCKL1Q9NWZ5 548 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 ATP6V1HQ9UI12 483 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 DMTF1Q9Y222 760 aa10.88□□□□□ -0.67
SNX13-202ENST00000409604 KRBA1A5PL33 1030 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 H7C0S8 307 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 VILLO15195 856 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 NPPBP16860 134 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 SDC1P18827 310 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 DSTNP60981 165 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 CDK6Q00534 326 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms