RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SLC25A23Q9BV35 468 aa15.96■□□□□ 0.15
SSB-202ENST00000409333 TMEM45AQ9NWC5 275 aa15.96■□□□□ 0.15
SSB-202ENST00000409333 NAALAD2Q9Y3Q0 740 aa15.96■□□□□ 0.15
SSB-202ENST00000409333 CCDC88CQ9P219 2028 aa15.96■□□□□ 0.15
SSB-202ENST00000409333 GVINP1Q7Z2Y8 2422 aa15.96■□□□□ 0.15
SSB-202ENST00000409333 NUP210LQ5VU65 1888 aa15.96■□□□□ 0.15
SSB-202ENST00000409333 ASPDHA6ND91 283 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 FBP2O00757 339 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 PRMT3O60678 531 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 GALR3O60755 368 aaPredicted RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 DNAJB6O75190 326 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 FAM58BPP0C7Q3 252 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 CLNS1AP54105 237 aaKnown RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 C21orf58P58505 322 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 NHLH1Q02575 133 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 C2orf80Q0P641 193 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 SLC9A5Q14940 896 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 PRAMEF17Q5VTA0 474 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 REP15Q6BDI9 236 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 SHISA5Q8N114 240 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 GLB1L3Q8NCI6 653 aaPredicted RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 DEFB124Q8NES8 71 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 OR9A4Q8NGU2 314 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 TESCQ96BS2 214 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 SERINC2Q96SA4 455 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 NPAS2Q99743 824 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 MAPKAP1Q9BPZ7 522 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 TUBB6Q9BUF5 446 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 FANCEQ9HB96 536 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 TXLNGQ9NUQ3 528 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 SIDT1Q9NXL6 827 aaKnown RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 FBXW2Q9UKT8 454 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 ASB4Q9Y574 426 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 CCDC154A6NI56 674 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 PRKRAO75569 313 aaKnown RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 PIM1P11309 404 aaPredicted RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 COX7A2P14406 83 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 PCSK2P16519 638 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 HPCAL1P37235 193 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 CLDN6P56747 220 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 NCALDP61601 193 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 INSM1Q01101 510 aaPredicted RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 KLC1Q07866 573 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 TRA2AQ13595 282 aaKnown RBP eCLIP15.95■□□□□ 0.142e-7■■■■□ 19.6
SSB-202ENST00000409333 RUNX2Q13950 521 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 GRM7Q14831 915 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 TRIP6Q15654 476 aaKnown RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 RBM44Q6ZP01 1051 aaKnown RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 RINLQ6ZS11 566 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 IKBIPQ70UQ0 350 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 TTC29Q8NA56 475 aaPredicted RBP15.95■□□□□ 0.14
SSB-202ENST00000409333 UCN3Q969E3 161 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 OR6C1Q96RD1 312 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 ROGDIQ9GZN7 287 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 REEP4Q9H6H4 257 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 ANKHQ9HCJ1 492 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 ENAMQ9NRM1 1142 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 OCIAD1Q9NX40 245 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 ATG4BQ9Y4P1 393 aa15.95■□□□□ 0.14
SSB-202ENST00000409333 A0A088AWK7 358 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 A0A0A6YYC8 382 aaPredicted RBP15.94■□□□□ 0.14
SSB-202ENST00000409333 GABRR3A8MPY1 467 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 I3L1I5 382 aaPredicted RBP15.94■□□□□ 0.14
SSB-202ENST00000409333 SGK494L7N484 410 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 AIM2O14862 343 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 FOXS1O43638 330 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 B3GALT2O43825 422 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 PGRP06401 933 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 FURINP09958 794 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 ZNF10P21506 573 aaPredicted RBP15.94■□□□□ 0.14
SSB-202ENST00000409333 ITGA1P56199 1179 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 TRA2BP62995 288 aaKnown RBP15.94■□□□□ 0.14
SSB-202ENST00000409333 PHC1P78364 1004 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 ACY1Q03154 408 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 FOXM1Q08050 763 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 ILKQ13418 452 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 NDUFA9Q16795 377 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 PGS1Q32NB8 556 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 GARNL3Q5VVW2 1013 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 RETREG3Q86VR2 466 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 GPR135Q8IZ08 494 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 METTL27Q8N6F8 245 aaPredicted RBP15.94■□□□□ 0.14
SSB-202ENST00000409333 EFCAB3Q8N7B9 438 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 OR5T3Q8NGG3 340 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 SLC7A6OSQ96CW6 309 aaPredicted RBP15.94■□□□□ 0.14
SSB-202ENST00000409333 NDUFAF1Q9Y375 327 aa15.94■□□□□ 0.14
SSB-202ENST00000409333 A0A1W2PP18 115 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 B2RBV5 119 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 ANGPT2O15123 496 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 RDH16O75452 317 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 IL6P05231 212 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 LAMP1P11279 417 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 CSTF2P33240 577 aaKnown RBP eCLIP15.93■□□□□ 0.14
SSB-202ENST00000409333 GSTM5P46439 218 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 GCGRP47871 477 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 ALDH9A1P49189 494 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 NUDT2P50583 147 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 LIM2P55344 173 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 E2F1Q01094 437 aa15.93■□□□□ 0.14
SSB-202ENST00000409333 STX5Q13190 355 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms