RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ALDH16A1Q8IZ83 802 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 THEM6Q8WUY1 208 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 ARMC5Q96C12 935 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RIOK2Q9BVS4 552 aaKnown RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 ABCB8Q9NUT2 735 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 TMEM248Q9NWD8 314 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SCML2Q9UQR0 700 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 PCDHB14Q9Y5E9 798 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 E7EQ34 232 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SNNO75324 88 aaPredicted RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 SOX30O94993 753 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RHCEP18577 417 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 ADH6P28332 368 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 HERV-K104P61576 105 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 COL28A1Q2UY09 1125 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 MS4A15Q8N5U1 240 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 FBXO22Q8NEZ5 403 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RPL10LQ96L21 214 aaKnown RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 SDHAF3Q9NRP4 125 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 MGAT4CQ9UBM8 478 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 LAMP5Q9UJQ1 280 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 GMFGO60234 142 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SPATA31D3P0C874 917 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 NTRK2Q16620 822 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 TMEM69Q5SWH9 247 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 NOXRED1Q6NXP6 359 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SPATA31D4Q6ZUB0 917 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 MCHR1Q99705 422 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 WDR26Q9H7D7 661 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 WDR45Q9Y484 360 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 J3KR12 359 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 PLSCR1O15162 318 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 KDELR3O43731 214 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 CHMP24386 653 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 CD97P48960 835 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RELAQ04206 551 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 IRF5Q13568 498 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 BORAQ6PGQ7 559 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 FBXO15Q8NCQ5 510 aaPredicted RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 CHFRQ96EP1 664 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SUSD3Q96L08 255 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 C12orf42Q96LP6 360 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 DGAT2Q96PD7 388 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 OR4K3Q96R72 315 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SYT4Q9H2B2 425 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 TP63Q9H3D4 680 aaPredicted RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 ZFR2Q9UPR6 939 aaKnown RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 KIDINS220Q9ULH0 1771 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 TRBV23OR9-2A0A075B6M9 112 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 WASHC1A8K0Z3 465 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 WASH3PC4AMC7 463 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 NPIPA5E9PKD4 350 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 SPARCP09486 303 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 KCTD18Q6PI47 426 aaPredicted RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 WASH2PQ6VEQ5 465 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ZNF584Q8IVC4 421 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ABHD11Q8NFV4 315 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 ABI3Q9P2A4 366 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 GRHPRQ9UBQ7 328 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 NPIPA1Q9UND3 350 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 LIPT1Q9Y234 373 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 TMEM14AQ9Y6G1 99 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 SOWAHBA6NEL2 793 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 PRAMEF11O60813 436 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 GTF2F2P13984 249 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 GGT5P36269 586 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 RPS13P62277 151 aaKnown RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 GAS6Q14393 721 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 PPP1R3AQ16821 1122 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 CDCA2Q69YH5 1023 aaPredicted RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 SLC15A4Q8N697 577 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 OR51G2Q8NGK0 314 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 FANK1Q8TC84 345 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 CASTOR1Q8WTX7 329 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 NSMAFQ92636 917 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 PMM1Q92871 262 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 NECAB3Q96P71 396 aaPredicted RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 KATNBL1Q9H079 304 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 TLE6Q9H808 572 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ELOVL2Q9NXB9 296 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ZDHHC7Q9NXF8 308 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ITGA5P08648 1049 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 BCKDHAP12694 445 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 KCNE1P15382 129 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 CD1DP15813 335 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms