RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 COL26A1Q96A83 441 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 C12orf66Q96MD2 445 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 COL21A1Q96P44 957 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SMAD5Q99717 465 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 MACROD1Q9BQ69 325 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SPNS1Q9H2V7 528 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 BRF2Q9HAW0 419 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SIRT5Q9NXA8 310 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 GULP1Q9UBP9 304 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 OR1A2Q9Y585 309 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PCDHGA10Q9Y5H3 936 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 DNAH14Q0VDD8 3507 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SLC5A10A0PJK1 596 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 GFRA2O00451 464 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PDPK1O15530 556 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 HTR1AP08908 422 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 ITIH1P19827 911 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 KELP23276 732 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SERPINB1P30740 379 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 FEN1P39748 380 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 BUD31P41223 144 aaPredicted RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 MAPK9P45984 424 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 RPS3AP61247 264 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SELENOWP63302 87 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 CASP12Q6UXS9 341 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 WDR36Q8NI36 951 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 ADAMTS16Q8TE57 1224 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 BADQ92934 168 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 ARRDC3Q96B67 414 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 TAMM41Q96BW9 452 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 LGALS12Q96DT0 336 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 CSF3RQ99062 836 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 KLHL25Q9H0H3 589 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 CAPN10Q9HC96 672 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 TM7SF3Q9NS93 570 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SEMA3GQ9NS98 782 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 RLIMQ9NVW2 624 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 MAFFQ9ULX9 164 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 IGLON5A6NGN9 336 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PRRT4C9JH25 899 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SLC16A6O15403 523 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PCDHGA12O60330 932 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PAK4O96013 591 aaPredicted RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 RPN2P04844 631 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 ITGAMP11215 1152 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 ANXA8P13928 327 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 ZNF12P17014 697 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PTX3P26022 381 aaPredicted RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PPP2R1BP30154 601 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 GRK3P35626 688 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SEC13P55735 322 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 MESP2Q0VG99 397 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SGCGQ13326 291 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 VEZF1Q14119 521 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 COLEC12Q5KU26 742 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PIAS4Q8N2W9 510 aaPredicted RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 PSD4Q8NDX1 1056 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 GEMIN6Q8WXD5 167 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 WDR12Q9GZL7 423 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 CACYBPQ9HB71 228 aaKnown RBP11.39□□□□□ -0.59
PCNX4-204ENST00000406949 BTNL2Q9UIR0 455 aa11.39□□□□□ -0.59
PCNX4-204ENST00000406949 BMPR1AP36894 532 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 MTAPQ13126 283 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 KDM4DQ6B0I6 523 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 FAM124AQ86V42 546 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 OR56A3Q8NH54 315 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 WFIKKN2Q8TEU8 576 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 JPH3Q8WXH2 748 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 DNASE1L2Q92874 299 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 ZNF347Q96SE7 839 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 C17orf62Q9BQA9 187 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 MIR1-1HGQ9H1L0 117 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 TPK1Q9H3S4 243 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 CUEDC1Q9NWM3 386 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 CLN6Q9NWW5 311 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 PPIL1Q9Y3C6 166 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 EDDM13A0A1B0GTR0 161 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 PTPN6P29350 595 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 DCDC1P59894 354 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 ST3GAL4Q11206 333 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 ELAVL3Q14576 367 aaKnown RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 ZNF77Q15935 545 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 SLC34A3Q8N130 599 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 ZNF514Q96K75 400 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 ALPK1Q96QP1 1244 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 BHLHE41Q9C0J9 482 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 MS4A12Q9NXJ0 267 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 FBXW2Q9UKT8 454 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 RNF6Q9Y252 685 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 PCDH17O14917 1159 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 TBX1O43435 398 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 JRKO75564 520 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 C8orf89P0DMQ9 161 aa11.38□□□□□ -0.59
PCNX4-204ENST00000406949 JUNBP17275 347 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-204ENST00000406949 CXCR2P25025 360 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms