RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CACNG6Q9BXT2 260 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 BARHL1Q9BZE3 327 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 NXF2Q9GZY0 626 aaKnown RBP13.49□□□□□ -0.25
DUSP28-202ENST00000405954 TKTL2Q9H0I9 626 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 MAGIXQ9H6Y5 334 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 SLC22A11Q9NSA0 550 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 MROH6A6NGR9 719 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CHP2O43745 196 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 SYN1P17600 705 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 GGT2P36268 569 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CD86P42081 329 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CPSF6Q16630 551 aaKnown RBP eCLIP13.49□□□□□ -0.25
DUSP28-202ENST00000405954 HKDC1Q2TB90 917 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 B3GALNT2Q8NCR0 500 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 OR2T11Q8NH01 316 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 PDLIM5Q96HC4 596 aaKnown RBP13.49□□□□□ -0.25
DUSP28-202ENST00000405954 NELL2Q99435 816 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 GINS4Q9BRT9 223 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CD244Q9BZW8 370 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 PSME4Q14997 1843 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 WDR81Q562E7 1941 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 HAS3O00219 553 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 ARPC5O15511 151 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 RP2O75695 350 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CD1DP15813 335 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 ZNF3P17036 446 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 SLC6A4P31645 630 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CLDN20P56880 219 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 GPR149Q86SP6 731 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 RFT1Q96AA3 541 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CREB3L1Q96BA8 519 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 TMED9Q9BVK6 235 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 WWOXQ9NZC7 414 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CLEC2DQ9UHP7 191 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 MAFFQ9ULX9 164 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 E2F3O00716 465 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 NDUFA2O43678 99 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 KLHL18O94889 574 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 SPDEFO95238 335 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ETFDHQ16134 617 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 LEXMQ3ZCV2 418 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 TOMM5Q8N4H5 51 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 SYT14Q8NB59 555 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ATAD1Q8NBU5 361 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 C12orf42Q96LP6 360 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 P2RY13Q9BPV8 354 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 KCTD3Q9Y597 815 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 J3KR12 359 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 NCR1O76036 304 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 OAZ2O95190 189 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 GKP32189 559 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 MAD2L1Q13257 205 aaPredicted RBP13.48□□□□□ -0.25
DUSP28-202ENST00000405954 PTPRNQ16849 979 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 Q3ZCU0 254 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 PDSS1Q5T2R2 415 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 IKBIPQ70UQ0 350 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 RAB11FIP2Q7L804 512 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 NPWQ8N729 165 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 REPS1Q96D71 796 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ART5Q96L15 291 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 DDOQ99489 341 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 GPR21Q99679 349 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 PIGVQ9NUD9 493 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 C14orf105Q9NVL8 296 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 LYARQ9NX58 379 aaKnown RBP13.48□□□□□ -0.25
DUSP28-202ENST00000405954 PTGFRNQ9P2B2 879 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
DUSP28-202ENST00000405954 HACL1Q9UJ83 578 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 SLC22A23A1A5C7 686 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 OR6C74A6NCV1 312 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 PLAG1Q6DJT9 500 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 TMIGD1Q6UXZ0 262 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 CILP2Q8IUL8 1156 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 CCDC36Q8IYA8 594 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 OR52P1PQ8NH57 321 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 SGK3Q96BR1 496 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 HRASLS5Q96KN8 279 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 RBP7Q96R05 134 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 GMLQ99445 158 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 GDF15Q99988 308 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 NTMT1Q9BV86 223 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 CDT1Q9H211 546 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 KCTD5Q9NXV2 234 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 CPA4Q9UI42 421 aa13.48□□□□□ -0.25
DUSP28-202ENST00000405954 ZNF670-ZNF695F2Z2N8 137 aa13.47□□□□□ -0.25
DUSP28-202ENST00000405954 KHNYNO15037 678 aaKnown RBP13.47□□□□□ -0.25
DUSP28-202ENST00000405954 IQCF3P0C7M6 154 aa13.47□□□□□ -0.25
DUSP28-202ENST00000405954 NDUFV1P49821 464 aa13.47□□□□□ -0.25
DUSP28-202ENST00000405954 EIF4HQ15056 248 aaKnown RBP13.47□□□□□ -0.25
DUSP28-202ENST00000405954 CXorf57Q6NSI4 855 aaKnown RBP13.47□□□□□ -0.25
DUSP28-202ENST00000405954 HSDL2Q6YN16 418 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms