RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CDKN2CP42773 168 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GPR3P46089 330 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GPLD1P80108 840 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CFHR1Q03591 330 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CEACAM7Q14002 265 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 HEPACAMQ14CZ8 416 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DPY19L1Q2PZI1 675 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 MUM1Q2TAK8 710 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ADPRMQ3LIE5 342 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 COQ5Q5HYK3 327 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PERM1Q5SV97 790 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 NDUFAF5Q5TEU4 345 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 C6orf163Q5TEZ5 329 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 NANOGP8Q6NSW7 305 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CYB5D1Q6P9G0 228 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ANGPTL8Q6UXH0 198 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ZNF621Q6ZSS3 439 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ABHD13Q7L211 337 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PRSS41Q7RTY9 318 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 KANSL1Q7Z3B3 1105 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 R3HCC1LQ7Z5L2 792 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 SPRED1Q7Z699 444 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 KIAA2013Q8IYS2 634 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DTWD1Q8N5C7 304 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 STARD8Q92502 1023 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 UCN3Q969E3 161 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ITCHQ96J02 903 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CGREF1Q99674 301 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 HOPXQ9BPY8 73 aaPredicted RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 TBCDQ9BTW9 1192 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 NLNQ9BYT8 704 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SLC6A16Q9GZN6 736 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DDX31Q9H8H2 851 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 NANOGQ9H9S0 305 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PDE7BQ9NP56 450 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 MYNNQ9NPC7 610 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PRDM7Q9NQW5 492 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SLC6A13Q9NSD5 602 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 TMEM45AQ9NWC5 275 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 VAPAQ9P0L0 249 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GMPR2Q9P2T1 348 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 EXO1Q9UQ84 846 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 CLCA2Q9UQC9 943 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 MRPS2Q9Y399 296 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 ATG4BQ9Y4P1 393 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PCDHB14Q9Y5E9 798 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 A0A0A6YYD5 115 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PRSS51A0A1B0GVH4 220 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 LNP1A1A4G5 178 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PRORSD1PA6NEY8 169 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ZSCAN9O15535 394 aaPredicted RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 ABCB7O75027 752 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ERAL1O75616 437 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 EPN2O95208 641 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ZBTB11O95625 1053 aaPredicted RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 NTRK1P04629 796 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 FURINP09958 794 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ALOX12P18054 663 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DDCP20711 480 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 MTTPP55157 894 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 KLC1Q07866 573 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SUZ12Q15022 739 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 SF3A2Q15428 464 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 ZNF385BQ569K4 471 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ZC3H12BQ5HYM0 836 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 FAM71E1Q6IPT2 247 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DLEU7Q6UYE1 221 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 RNF44Q7L0R7 432 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SLC15A3Q8IY34 581 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CLEC4FQ8N1N0 589 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 METTL27Q8N6F8 245 aaPredicted RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 RCBTB1Q8NDN9 531 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 OR8J2Q8NGG1 315 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.52□□□□□ -1.853e-47■□□□□ 9.6
RTN4-208ENST00000404909 PNPT1Q8TCS8 783 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 UTP15Q8TED0 518 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 GAL3ST3Q96A11 431 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 TM4SF19Q96DZ7 209 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 THAP11Q96EK4 314 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GBP5Q96PP8 586 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 MAPKAP1Q9BPZ7 522 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 TWSG1Q9GZX9 223 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PCDHAC1Q9H158 963 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ATAD3AQ9NVI7 634 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CMTM6Q9NX76 183 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SIRT5Q9NXA8 310 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PRPF19Q9UMS4 504 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 PCDHGB4Q9UN71 923 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 NAALAD2Q9Y3Q0 740 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SNX8Q9Y5X2 465 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GVINP1Q7Z2Y8 2422 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SPTBN2O15020 2390 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SCN2AQ99250 2005 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CELSR3Q9NYQ7 3312 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 LY6G6EA0A0G2JKS1 128 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 EME2A4GXA9 379 aaPredicted RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 PRR33A8MZF0 331 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 TMEM150CB9EJG8 249 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 H0Y3Z8 333 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SGK494L7N484 410 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms