RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ZNF480Q8WV37 535 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 FOXJ1Q92949 421 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 FAM129BQ96TA1 746 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 CLN6Q9NWW5 311 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 CFL2Q9Y281 166 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 ATP11BQ9Y2G3 1177 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 A0A1W2PRB8 838 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 LOC110117498-PIK3R3F6TDL0 507 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PCDH17O14917 1159 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SNPHO15079 494 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 TGM5O43548 720 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 LILRB3O75022 631 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 DLGAP3O95886 979 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PIPP12273 146 aaPredicted RBP10.27□□□□□ -0.77
CLIP4-204ENST00000404424 HOXD12P35452 270 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 NNMTP40261 264 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CRISP1P54107 249 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 DEFA1P59665 94 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 DEFA3P59666 94 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 BCL2A1Q16548 175 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SLC5A12Q1EHB4 618 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CNKSR3Q6P9H4 555 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CCDC149Q6ZUS6 474 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 IKBIPQ70UQ0 350 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 ADIPOR2Q86V24 386 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 RNF130Q86XS8 419 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 NRSN1Q8IZ57 195 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PIK3R3Q92569 461 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 HTRA1Q92743 480 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 LRIG1Q96JA1 1093 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CHCHD6Q9BRQ6 235 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CENPOQ9BU64 300 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SGPP1Q9BX95 441 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 ITM2CQ9NQX7 267 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 GULP1Q9UBP9 304 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 ICKQ9UPZ9 632 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 TSC22D4Q9Y3Q8 395 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CFAP20Q9Y6A4 193 aaKnown RBP10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PRAMEF33A0A0G2JMD5 474 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PIPSLA2A3N6 862 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 J3KTA2 159 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CCRL2O00421 344 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 ZW10O43264 779 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PRAMEF10O60809 474 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 IFNW1P05000 195 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 HSMCR30P0CW71 290 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 GJA1P17302 382 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 UQCRC2P22695 453 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PDHA2P29803 388 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SEPHS1P49903 392 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CASP9P55211 416 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 TAS2R50P59544 299 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 KCNJ8Q15842 424 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 MPEG1Q2M385 716 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SPANXN2Q5MJ10 180 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 FRMPD2BQ6IN97 320 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 AKAP14Q86UN6 197 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 UBE2E3Q969T4 207 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 CIDECQ96AQ7 238 aaPredicted RBP10.27□□□□□ -0.77
CLIP4-204ENST00000404424 AP2M1Q96CW1 435 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SAMD11Q96NU1 681 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 MGLLQ99685 303 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 WRAP53Q9BUR4 548 aaKnown RBP10.27□□□□□ -0.77
CLIP4-204ENST00000404424 RACGAP1Q9H0H5 632 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
CLIP4-204ENST00000404424 DKK3Q9UBP4 350 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 FTSJ1Q9UET6 329 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 KCND3Q9UK17 655 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 MAP4K5Q9Y4K4 846 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 PCDHGB6Q9Y5F9 930 aa10.27□□□□□ -0.77
CLIP4-204ENST00000404424 A0A075B6Q4 140 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 TRBC2A0A5B9 178 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 TGFB1P01137 390 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 CHMP24386 653 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 SLC15A1P46059 708 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 MC1RQ01726 317 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NOGQ13253 232 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF658BQ4V348 819 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF805Q5CZA5 627 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ATAD3BQ5T9A4 648 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 PLAG1Q6DJT9 500 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 TAGAPQ8N103 731 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 AQP11Q8NBQ7 271 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 FAM46DQ8NEK8 389 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 SLC5A11Q8WWX8 675 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 IRF7Q92985 503 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 GTPBP3Q969Y2 492 aaKnown RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 TRNT1Q96Q11 434 aaKnown RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 CCDC32Q9BV29 185 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 RC3H2Q9HBD1 1191 aaKnown RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 TMEM165Q9HC07 324 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ASAH2Q9NR71 780 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 CRNNQ9UBG3 495 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 IL36AQ9UHA7 158 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 PCM1Q15154 2024 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 PSMD11O00231 422 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ASNA1O43681 348 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 KIAA0513O60268 411 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms