RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 LARP4Q71RC2 724 aaKnown RBP eCLIP31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 MAELQ96JY0 434 aaKnown RBP31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 EBPLQ9BY08 206 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 THSD1Q9NS62 852 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 POLR3HQ9Y535 204 aaPredicted RBP31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 CACNA1AO00555 2505 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 VPS4BO75351 444 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 SLAMF1Q13291 335 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 RUNX2Q13950 521 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 TUBB8Q3ZCM7 444 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 CCNYL2Q5T2Q4 361 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 ARHGAP40Q5TG30 622 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 FAM199XQ6PEV8 388 aaPredicted RBP31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 FNDC5Q8NAU1 212 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 MR1Q95460 341 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 METTL2AQ96IZ6 378 aaKnown RBP31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 OR52B2Q96RD2 323 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 FAM107BQ9H098 131 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 KCNK13Q9HB14 408 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 SLC22A11Q9NSA0 550 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 ADAM29Q9UKF5 820 aa31.5■■■□□ 2.63
CSNK1E-204ENST00000403904 A0A0A6YYD5 115 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 A0A0G2JND7 137 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 TMPRSS11DO60235 418 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 PRR35P0CG20 571 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 AGXTP21549 392 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 FBLP22087 321 aaKnown RBP31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 DSG2Q14126 1118 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 NXNQ6DKJ4 435 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 NOXRED1Q6NXP6 359 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 GALNT18Q6P9A2 607 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 CYP20A1Q6UW02 462 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 ZCCHC7Q8N3Z6 543 aaKnown RBP31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 SIRT5Q9NXA8 310 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 AHCTF1Q8WYP5 2266 aa31.49■■■□□ 2.63
CSNK1E-204ENST00000403904 SCN2AQ99250 2005 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 ARHGAP10A1A4S6 786 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 STMND1H3BQB6 276 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 PCDH7O60245 1069 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 TIA1P31483 386 aaKnown RBP eCLIP31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 C1orf50Q9BV19 199 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 YIPF2Q9BWQ6 316 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 MCM8Q9UJA3 840 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 DLGAP4Q9Y2H0 992 aa31.48■■■□□ 2.63
CSNK1E-204ENST00000403904 CHST10O43529 356 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 COX15Q7KZN9 410 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 MTERF4Q7Z6M4 381 aaKnown RBP31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 CA13Q8N1Q1 262 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 MAPKAP1Q9BPZ7 522 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 DPH2Q9BQC3 489 aaPredicted RBP31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 SIKE1Q9BRV8 207 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 NPLQ9BXD5 320 aaPredicted RBP31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 CHST8Q9H2A9 424 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 RABEP2Q9H5N1 569 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 FBXW2Q9UKT8 454 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 PADI1Q9ULC6 663 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 TMED5Q9Y3A6 229 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 MAP4K5Q9Y4K4 846 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 GNG14A0A1W2PPG7 69 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 MYO1DO94832 1006 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 CCNYL3P0C7X3 344 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 LBPP18428 481 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 DRD4P21917 467 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 CD82P27701 267 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 LIM2P55344 173 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 ZNF517Q6ZMY9 492 aaPredicted RBP31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 RIPOR1Q6ZS17 1223 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 OR51Q1Q8NH59 317 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 ACTRT2Q8TDY3 377 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 IFT80Q9P2H3 777 aaPredicted RBP31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 TRPC4Q9UBN4 977 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 DAPP1Q9UN19 280 aa31.47■■■□□ 2.63
CSNK1E-204ENST00000403904 CEP295Q9C0D2 2601 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 SHOX2O60902 331 aaPredicted RBP31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 ANXA4P09525 319 aaPredicted RBP31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 FAM58BPP0C7Q3 252 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 MAPK12P53778 367 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 LSM12Q3MHD2 195 aaKnown RBP31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 MRM1Q6IN84 353 aaKnown RBP31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 ACAD11Q709F0 780 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 CPLX4Q7Z7G2 160 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 NLGN4XQ8N0W4 816 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 NLGN4YQ8NFZ3 816 aaPredicted RBP31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 FCRL1Q96LA6 429 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 TCF7L2Q9NQB0 619 aa31.46■■■□□ 2.63
CSNK1E-204ENST00000403904 ONECUT2O95948 504 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 HNRNPH2P55795 449 aaKnown RBP31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 EMX2Q04743 252 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 ESX1Q8N693 406 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 CEP70Q8NHQ1 597 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 PEX11GQ96HA9 241 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 ZNF578Q96N58 590 aaPredicted RBP31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 CLK4Q9HAZ1 481 aaKnown RBP31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 KCMF1Q9P0J7 381 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 ACSL6Q9UKU0 697 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 ASB4Q9Y574 426 aa31.45■■■□□ 2.63
CSNK1E-204ENST00000403904 CCDC88CQ9P219 2028 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 RAD1O60671 282 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 PIM1P11309 404 aaPredicted RBP31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 ERVK-8P63133 956 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms