RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TMEM126BQ8IUX1 230 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 ACOT4Q8N9L9 421 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 KCT2Q8NC54 265 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 DNAJC9Q8WXX5 260 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 LRTOMTQ8WZ04 291 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 FIG4Q92562 907 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 TRIM4Q9C037 500 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 PRMT8Q9NR22 394 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-205ENST00000401607 AURKCQ9UQB9 309 aa24.37■■□□□ 1.49
CPNE1-205ENST00000401607 LMO7DNF2Z398 122 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 FAM58BPP0C7Q3 252 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 ALDH9A1P49189 494 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 RAB8AP61006 207 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 RELAQ04206 551 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 DEFB133Q30KQ1 61 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 FAM180BQ6P0A1 224 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 DGLUCYQ7Z3D6 616 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 ZCCHC7Q8N3Z6 543 aaKnown RBP24.36■■□□□ 1.49
CPNE1-205ENST00000401607 AVL9Q8NBF6 648 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 SRFBP1Q8NEF9 429 aaKnown RBP24.36■■□□□ 1.49
CPNE1-205ENST00000401607 PNPT1Q8TCS8 783 aaKnown RBP24.36■■□□□ 1.49
CPNE1-205ENST00000401607 UCN3Q969E3 161 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 ZNF764Q96H86 408 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-205ENST00000401607 EFHD1Q9BUP0 239 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 UCKL1Q9NWZ5 548 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 C5AR2Q9P296 337 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 POMT2Q9UKY4 750 aa24.36■■□□□ 1.49
CPNE1-205ENST00000401607 A0A1W2PRB8 838 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 CXCR6O00574 342 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 GSTA4O15217 222 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 P2RX6O15547 441 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 PIAS2O75928 621 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 TSFMP43897 325 aaKnown RBP24.35■■□□□ 1.49
CPNE1-205ENST00000401607 SNRPNP63162 240 aaKnown RBP24.35■■□□□ 1.49
CPNE1-205ENST00000401607 RGS1Q08116 209 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 TBCELQ5QJ74 424 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 HMBOX1Q6NT76 420 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 GAL3ST3Q96A11 431 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 THAP11Q96EK4 314 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 SLAMF7Q9NQ25 335 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 ASB4Q9Y574 426 aa24.35■■□□□ 1.49
CPNE1-205ENST00000401607 TIPRLO75663 272 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 CAPNS1P04632 268 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 UMPSP11172 480 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 CERS1P27544 350 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SLAMF1Q13291 335 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SLC9A5Q14940 896 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 FRMPD2BQ6IN97 320 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 IZUMO2Q6UXV1 221 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 RNF44Q7L0R7 432 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SDR16C5Q8N3Y7 309 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 NECAB3Q96P71 396 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-205ENST00000401607 ZFYVE21Q9BQ24 234 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 UCK1Q9HA47 277 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 TAS2R9Q9NYW1 312 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 ANAPC2Q9UJX6 822 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 PCDHGB4Q9UN71 923 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SPAG17Q6Q759 2223 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SH3BP5O60239 455 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SCELO95171 688 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 SLC35G6P0C7Q6 338 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 TAF11Q15544 211 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 MTX3Q5HYI7 312 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 NDUFAF5Q5TEU4 345 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 OGFOD3Q6PK18 319 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 WDR5BQ86VZ2 330 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 ZZZ3Q8IYH5 903 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 PAPD5Q8NDF8 572 aaKnown RBP24.34■■□□□ 1.49
CPNE1-205ENST00000401607 ZNF184Q99676 751 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-205ENST00000401607 KLHL4Q9C0H6 718 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 CHST8Q9H2A9 424 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 THADAQ6YHU6 1953 aa24.34■■□□□ 1.49
CPNE1-205ENST00000401607 NUP214P35658 2090 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-205ENST00000401607 LOC105369274A0A096LPK9 316 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 LOC102723532A0A0G2JNH3 316 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 A0A1B0GVT2 93 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 GMNNO75496 209 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 UBXN7O94888 489 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 KCNK5O95279 499 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 DRD2P14416 443 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 IL10P22301 178 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 PPIBP23284 216 aaKnown RBP24.33■■□□□ 1.49
CPNE1-205ENST00000401607 FRKP42685 505 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-205ENST00000401607 CPZQ66K79 652 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 ARMC6Q6NXE6 501 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 ERMP1Q7Z2K6 904 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 OR4N4Q8N0Y3 316 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 NATD1Q8N6N6 113 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 OR52E4Q8NGH9 312 aa24.33■■□□□ 1.49
CPNE1-205ENST00000401607 UTP15Q8TED0 518 aaKnown RBP24.33■■□□□ 1.49
CPNE1-205ENST00000401607 KNL1Q8NG31 2342 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 LILRA5A6NI73 299 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 PDPK1O15530 556 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 PEX1O43933 1283 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 ZNF888P0CJ79 500 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-205ENST00000401607 SMIM10L1P0DMW3 83 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 MVDP53602 400 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 PCBP4P57723 403 aaKnown RBP24.32■■□□□ 1.48
CPNE1-205ENST00000401607 TGM3Q08188 693 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms