RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 STARD3Q14849 445 aa20.08■□□□□ 0.8
CTCF-202ENST00000401394 IFI44LQ53G44 452 aa20.08■□□□□ 0.8
CTCF-202ENST00000401394 TMPRSS11BQ86T26 416 aa20.08■□□□□ 0.8
CTCF-202ENST00000401394 CADM2Q8N3J6 435 aa20.08■□□□□ 0.8
CTCF-202ENST00000401394 DTX3Q8N9I9 347 aa20.08■□□□□ 0.8
CTCF-202ENST00000401394 ABCG4Q9H172 646 aa20.08■□□□□ 0.8
CTCF-202ENST00000401394 HELZP42694 1942 aaKnown RBP20.08■□□□□ 0.8
CTCF-202ENST00000401394 INPPL1O15357 1258 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 PUM1Q14671 1186 aaKnown RBP eCLIP20.07■□□□□ 0.8
CTCF-202ENST00000401394 ZFP41Q8N8Y5 198 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 ASCC1Q8N9N2 400 aaKnown RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 HJURPQ8NCD3 748 aaPredicted RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 OR7G3Q8NG95 312 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 RAB8BQ92930 207 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 NEIL2Q969S2 332 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 YME1L1Q96TA2 773 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SEPT4O43236 478 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 CSO75390 466 aaKnown RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 CCNB2O95067 398 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 GADD45GO95257 159 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 IL7P13232 177 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 CTSCP53634 463 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 AP1S1P61966 158 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SNRPD2P62316 118 aaKnown RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 TNFAIP8L2Q6P589 184 aaPredicted RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 Q6ZVL8 140 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 PLD4Q96BZ4 506 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SLC6A18Q96N87 628 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 ZNF334Q9HCZ1 680 aaPredicted RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 B4GALT6Q9UBX8 382 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SNX11Q9Y5W9 270 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 TRAV19A0A0A6YYK7 116 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 ADAMDEC1O15204 470 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SLITRK5O94991 958 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 PTPN2P17706 415 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 CSTF3Q12996 717 aaKnown RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 GGTA1PQ4G0N0 100 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 FLYWCH1Q4VC44 716 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 ARMCX6Q7L4S7 300 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SHFQ7M4L6 423 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 CMTM8Q8IZV2 173 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 C7orf57Q8NEG2 295 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 C11orf24Q96F05 449 aaPredicted RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 RAD9AQ99638 391 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 SPATA6Q9NWH7 488 aaPredicted RBP20.07■□□□□ 0.8
CTCF-202ENST00000401394 MKLN1Q9UL63 735 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 POFUT2Q9Y2G5 429 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 PCDHB7Q9Y5E2 793 aa20.07■□□□□ 0.8
CTCF-202ENST00000401394 TRBC2A0A5B9 178 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 CENPXA8MT69 81 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 GREM1O60565 184 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 TNFRSF21O75509 655 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 PRKAR2AP13861 404 aaKnown RBP20.06■□□□□ 0.8
CTCF-202ENST00000401394 PCGF2P35227 344 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 GPNMBQ14956 572 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 CCSAPQ6IQ19 270 aaPredicted RBP20.06■□□□□ 0.8
CTCF-202ENST00000401394 AGTRAPQ6RW13 159 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 CAMKK1Q8N5S9 505 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 ZNF556Q9HAH1 456 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 NOTOA8MTQ0 251 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 H3BN98 237 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 RGS13O14921 159 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 CAPN5O15484 640 aaPredicted RBP20.06■□□□□ 0.8
CTCF-202ENST00000401394 SGTAO43765 313 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 CDRT1O95170 752 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 OR56A5P0C7T3 313 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 PRKCAP17252 672 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 ETV3P41162 512 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 CAMK2BQ13554 666 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 INSL4Q14641 139 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 PLAG1Q6DJT9 500 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 FRMPD2BQ6IN97 320 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 DPY19L3Q6ZPD9 716 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 RNF165Q6ZSG1 346 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 OR9Q1Q8NGQ5 310 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 C11orf54Q9H0W9 315 aaPredicted RBP20.06■□□□□ 0.8
CTCF-202ENST00000401394 ANKHQ9HCJ1 492 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 RUVBL1Q9Y265 456 aaKnown RBP20.06■□□□□ 0.8
CTCF-202ENST00000401394 SPEGQ15772 3267 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 MYO15AQ9UKN7 3530 aa20.06■□□□□ 0.8
CTCF-202ENST00000401394 MYCP01106 439 aaPredicted RBP20.05■□□□□ 0.8
CTCF-202ENST00000401394 ATP1B2P14415 290 aaPredicted RBP20.05■□□□□ 0.8
CTCF-202ENST00000401394 PRPH2P23942 346 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 C22orf42Q6IC83 251 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 ZNF544Q6NX49 715 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 TMPRSS11AQ6ZMR5 421 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 GFYI3L273 518 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 TSPAN6O43657 245 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 TNNI3P19429 210 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 CRYBB2P43320 205 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 CDK6Q00534 326 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 GALK2Q01415 458 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 GPR33Q49SQ1 333 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 ZNF366Q8N895 744 aa20.05■□□□□ 0.8
CTCF-202ENST00000401394 MOV10Q9HCE1 1003 aaKnown RBP20.05■□□□□ 0.8
CTCF-202ENST00000401394 WASHC1A8K0Z3 465 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 AP2A2O94973 939 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 CHI3L1P36222 383 aaPredicted RBP20.04■□□□□ 0.8
CTCF-202ENST00000401394 RAB25P57735 213 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 NFE2L1Q14494 772 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms