RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PI4KAP42356 2102 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SGTAO43765 313 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RASGRP1O95267 797 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 KRT75O95678 551 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SLC16A8O95907 504 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RYKP34925 604 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SPINT3P49223 89 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MRPS15P82914 257 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TRAM1L1Q8N609 369 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF675Q8TD23 568 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF296Q8WUU4 475 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SUSD6Q92537 303 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 IRF7Q92985 503 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 NUS1Q96E22 293 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FEVQ99581 238 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 C1QTNF3Q9BXJ4 246 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ASIC5Q9NY37 505 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LAMA4Q16363 1823 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 A8MU76 341 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 AP2A2O94973 939 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TIA1P31483 386 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MANFP55145 182 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RPS7P62081 194 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ADPRMQ3LIE5 342 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RNASE12Q5GAN4 147 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LRIF1Q5T3J3 769 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FAM124AQ86V42 546 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TCEAL8Q8IYN2 117 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MMP21Q8N119 569 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 L3MBTL4Q8NA19 623 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SLC43A3Q8NBI5 491 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PHF10Q8WUB8 498 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ALG14Q96F25 216 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MAGEB10Q96LZ2 347 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CEP295NLQ96MC4 621 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 GTPBP2Q9BX10 602 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RNF167Q9H6Y7 350 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MRPS23Q9Y3D9 190 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 C5orf42Q9H799 3197 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 A0A1B0GW55 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 KRBA1A5PL33 1030 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM202A6NGA9 273 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FADS2P1A8MWK0 482 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SLC22A1O15245 554 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TSC22D2O75157 780 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SEC14L2O76054 403 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FGF18O76093 207 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4L2P0CJ85 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4L3P0CJ86 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4L4P0CJ87 422 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4L5P0CJ88 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4L6P0CJ89 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4L7P0CJ90 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SOX6P35712 828 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 NR4A2P43354 598 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RXRGP48443 463 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RAB8AP61006 207 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PTSQ03393 145 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 NPRL3Q12980 569 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DPY19L1Q2PZI1 675 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ARTNQ5T4W7 220 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FAM131AQ6UXB0 335 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PARS2Q7L3T8 475 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF551Q7Z340 670 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 C16orf62Q7Z3J2 963 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 BCDIN3DQ7Z5W3 292 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ADAMTS19Q8TE59 1207 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LGALS12Q96DT0 336 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ART5Q96L15 291 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 COL21A1Q96P44 957 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MAPKAP1Q9BPZ7 522 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PDCD10Q9BUL8 212 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DNAJC27Q9NZQ0 273 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUX4Q9UBX2 424 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FBXW2Q9UKT8 454 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CCL26Q9Y258 94 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PCDHGA4Q9Y5G9 962 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FEZF1A0PJY2 475 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ISM1B1AKI9 464 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 KCNK5O95279 499 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF8P17098 575 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 NTSP30990 170 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF630Q2M218 657 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DDI2Q5TDH0 399 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LIPJQ5W064 366 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ALG1LQ6GMV1 187 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TRIM40Q6P9F5 258 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 USP43Q70EL4 1123 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PTOV1Q86YD1 416 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 GALNT13Q8IUC8 556 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FAM217AQ8IXS0 508 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CPXM2Q8N436 756 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SLC35G5Q96KT7 338 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SPNS1Q9H2V7 528 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FBRSQ9HAH7 460 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TDP1Q9NUW8 608 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PAK1IP1Q9NWT1 392 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms