RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 AQP6Q13520 282 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 TEAD4Q15561 434 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 HNRNPA1L2Q32P51 320 aaKnown RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 BTLAQ7Z6A9 289 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 TECPR1Q7Z6L1 1165 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 LRRTM4Q86VH4 590 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 GPR65Q8IYL9 337 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 SLC34A3Q8N130 599 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CENPSQ8N2Z9 138 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 OR10G6Q8NH81 332 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 WDR36Q8NI36 951 aaKnown RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 FNDC8Q8TC99 324 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 MAGEB10Q96LZ2 347 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CSF3RQ99062 836 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 MAGIXQ9H6Y5 334 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ANKRA2Q9H9E1 313 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 HMG20AQ9NP66 347 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CORO2BQ9UQ03 480 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 MAN2B2Q9Y2E5 1009 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 THSD7BQ9C0I4 1608 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 GFRA2O00451 464 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 PDPK1O15530 556 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 PCDHGA12O60330 932 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CKMT1AP12532 417 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 KELP23276 732 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 GDI1P31150 447 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 GRK3P35626 688 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 RAE1P78406 368 aaKnown RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 KCNC3Q14003 757 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 TIGD6Q17RP2 521 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 COLEC12Q5KU26 742 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 XAF1Q6GPH4 301 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ADGRD2Q7Z7M1 963 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ZFP90Q8TF47 636 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 UBE2E3Q969T4 207 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 NACC2Q96BF6 587 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 DNAJC27Q9NZQ0 273 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 PCYT1BQ9Y5K3 369 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 H0YIV9 168 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 RFXAPO00287 272 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 EIF3FO00303 357 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ERI3O43414 337 aaKnown RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CCNB2O95067 398 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 OR12D1P0DN82 309 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 GPX2P18283 190 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 TMBIM6P55061 237 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 MXD1Q05195 221 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 SMU1Q2TAY7 513 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ZNF829Q3KNS6 432 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 C9orf64Q5T6V5 341 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 MFSD4BQ5TF39 518 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 FAM109BQ6ICB4 259 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 CCDC116Q8IYX3 515 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 OR8J2Q8NGG1 315 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ZCCHC10Q8TBK6 192 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 DNASE1L2Q92874 299 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ALPK1Q96QP1 1244 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 WDR26Q9H7D7 661 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 TMEM184CQ9NVA4 438 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 SPATA6Q9NWH7 488 aaPredicted RBP9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 MS4A12Q9NXJ0 267 aa9.98□□□□□ -0.81
CPSF1P1-201ENST00000397477 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CLDN25C9JDP6 229 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 FRS3O43559 492 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 KDM1AO60341 852 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 PRAMEF10O60809 474 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 PTX3P26022 381 aaPredicted RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 DDX6P26196 483 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 S100A5P33763 92 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 GP2P55259 537 aaKnown RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CDC42P60953 191 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 TARDBPQ13148 414 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 LASP1Q14847 261 aaKnown RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 MAD2L1BPQ15013 274 aaPredicted RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 ZNF750Q32MQ0 723 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CDKL4Q5MAI5 379 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CALHM3Q86XJ0 350 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 UCN3Q969E3 161 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 TAMM41Q96BW9 452 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 TRIT1Q9H3H1 467 aaKnown RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CHD7Q9P2D1 2997 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 TRBV5-3A0A0A0MS03 114 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 TBX1O43435 398 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 FGF19O95750 216 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 IGFBP1P08833 259 aaPredicted RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 HTR1AP08908 422 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 NCBP2P52298 156 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 MLLT10P55197 1068 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 SELENOWP63302 87 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 MLLT1Q03111 559 aaPredicted RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 ST3GAL4Q11206 333 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 KLHL17Q6TDP4 642 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CASP12Q6UXS9 341 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 BCDIN3DQ7Z5W3 292 aaKnown RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 RBM45Q8IUH3 476 aaKnown RBP9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 CPA6Q8N4T0 437 aa9.97□□□□□ -0.81
CPSF1P1-201ENST00000397477 OR56A3Q8NH54 315 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms