RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 HOXD4P09016 255 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 RNH1P13489 461 aaKnown RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TFEBP19484 476 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 AHRP35869 848 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 SLC1A2P43004 574 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 AP1S2P56377 157 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 BTG2P78543 158 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TIAL1Q01085 375 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TFF3Q07654 80 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 CSHL1Q14406 222 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TERF2Q15554 542 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TRIP13Q15645 432 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 CMPK2Q5EBM0 449 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 COX20Q5RI15 118 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 ANKRD22Q5VYY1 191 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 PAQR3Q6TCH7 311 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 RGS9BPQ6ZS82 235 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 CD163Q86VB7 1156 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 DMRTC2Q8IXT2 367 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 MYO1HQ8N1T3 1032 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TMEM156Q8N614 296 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TRPV3Q8NET8 790 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 OR56A3Q8NH54 315 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 GABPB2Q8TAK5 448 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 NT5CQ8TCD5 201 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 ATL1Q8WXF7 558 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 MDFIQ99750 246 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 RBCK1Q9BYM8 510 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TRIM54Q9BYV2 358 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 RNF6Q9Y252 685 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 YARS2Q9Y2Z4 477 aaKnown RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 MAD1L1Q9Y6D9 718 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 PRRC2AP48634 2157 aaKnown RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 PABPN1LA6NDY0 278 aaKnown RBP8.16□□□□□ -1.1
CAPN3-208ENST00000397204 ADARB2-AS1A8MUL3 147 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 HS6ST1O60243 411 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 DNAJC13O75165 2243 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF888P0CJ79 500 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-208ENST00000397204 SMIM10L1P0DMW3 83 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 MAOAP21397 527 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 MAGEA3P43357 314 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 CLCN2P51788 898 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 ART1P52961 327 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 TERF1P54274 439 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 IL2P60568 153 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 OLR1P78380 273 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 PMPCAQ10713 525 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 BBS9Q3SYG4 887 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 GXYLT1Q4G148 440 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 EMC4Q5J8M3 183 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 MBOAT1Q6ZNC8 495 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF662Q6ZS27 426 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 CLYBLQ8N0X4 340 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 CYP4Z2PQ8N1L4 340 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 MARVELD2Q8N4S9 558 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 APCDD1LQ8NCL9 501 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 B3GNT7Q8NFL0 401 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 UTP15Q8TED0 518 aaKnown RBP8.16□□□□□ -1.1
CAPN3-208ENST00000397204 FBXL8Q96CD0 374 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 PDLIM5Q96HC4 596 aaKnown RBP8.16□□□□□ -1.1
CAPN3-208ENST00000397204 SMIM10Q96HG1 83 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 SERPINB12Q96P63 405 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF559Q9BR84 538 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 FAM167BQ9BTA0 163 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 GSX2Q9BZM3 304 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 UCK2Q9BZX2 261 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 SAP130Q9H0E3 1048 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 RBSNQ9H1K0 784 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 ARL15Q9NXU5 204 aa8.16□□□□□ -1.1
CAPN3-208ENST00000397204 PPIEQ9UNP9 301 aaKnown RBP8.16□□□□□ -1.1
CAPN3-208ENST00000397204 TRBV11-1A0A0K0K1C0 115 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 SYNDIG1LA6NDD5 238 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 A8MUA0 341 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 CLDN4O14493 209 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 CDC40O60508 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
CAPN3-208ENST00000397204 ITGA10O75578 1167 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 ZFAND5O76080 213 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 B3GALT4O96024 378 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 AHSGP02765 367 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 TUBB4AP04350 444 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 SERPINA6P08185 405 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 F7P08709 466 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-208ENST00000397204 ENO2P09104 434 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-208ENST00000397204 CD99P14209 185 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 RFC3P40938 356 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 VPS41P49754 854 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 SSR4P51571 173 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 GPR143P51810 404 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 RAB8AP61006 207 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 PPIAP62937 165 aaKnown RBP8.15□□□□□ -1.1
CAPN3-208ENST00000397204 PHKG1Q16816 387 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 CATSPEREQ5SY80 951 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 MDGA2Q7Z553 956 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 GPALPP1Q8IXQ4 340 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 C2CD4AQ8NCU7 369 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms