RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CAPSQ13938 189 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 LASP1Q14847 261 aaKnown RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 TUBA1AQ71U36 451 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 C1orf52Q8N6N3 182 aaKnown RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 MUC13Q9H3R2 512 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 RPS10P5Q9NQ39 176 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 DNAJB9Q9UBS3 223 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 FLRT2O43155 660 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 HOXB6P17509 224 aaKnown RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 POLR2CP19387 275 aaPredicted RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 MARVELD2Q8N4S9 558 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 PLCXD1Q9NUJ7 323 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 MED16Q9Y2X0 877 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 PTCH2Q9Y6C5 1203 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 MEIS3P2A8K0S8 358 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 MT-CO2P00403 227 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 MAPK3P27361 379 aaPredicted RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 NSG1P42857 185 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 IDH3AP50213 366 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 CCNHP51946 323 aaPredicted RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 NPRL3Q12980 569 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 RAB31Q13636 194 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 HNF4GQ14541 408 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 ZNF367Q7RTV3 350 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 ZNF675Q8TD23 568 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 GAB3Q8WWW8 586 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 ITPAQ9BY32 194 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 NPFFR2Q9Y5X5 522 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 GXYLT2A0PJZ3 443 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 SLC2A5P22732 501 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 ACVR1BP36896 505 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 STT3AP46977 705 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 OGDHQ02218 1023 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 PRRT3Q5FWE3 981 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 SUSD1Q6UWL2 747 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 TOMM40LQ969M1 308 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 FAM173AQ9BQD7 235 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 SLC22A14Q9Y267 594 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 H3BNX3 289 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 WNT10BO00744 389 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 WNT9AO14904 365 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 EDF1O60869 148 aaKnown RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 CKMT1AP12532 417 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 RHCEP18577 417 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 CCNFP41002 786 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 DGKQP52824 942 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 MEX3BQ6ZN04 569 aaKnown RBP11.92□□□□□ -0.5
SMU1-201ENST00000397149 CHPT1Q8WUD6 406 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 RAB21Q9UL25 225 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 SQORQ9Y6N5 450 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
SMU1-201ENST00000397149 FMO6PO60774 539 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 CD79AP11912 226 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 FLYWCH1Q4VC44 716 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 TMCO2Q7Z6W1 182 aaPredicted RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 COG8Q96MW5 612 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 OIP5O43482 229 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 LILRB3O75022 631 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 OR1E2P47887 323 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 LYSMD3Q7Z3D4 306 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 GPR137CQ8N3F9 429 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 CD99L2Q8TCZ2 262 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 GEMIN6Q8WXD5 167 aaKnown RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 PTERQ96BW5 349 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 VPS29Q9UBQ0 182 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 DNAJB11Q9UBS4 358 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 ZFR2Q9UPR6 939 aaKnown RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 SLC6A6P31641 620 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 PNLIPRP1P54315 467 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 VSX2P58304 361 aaPredicted RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 ST3GAL3Q11203 375 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 GKN2Q86XP6 184 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 PRELID2Q8N945 189 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 SLC44A1Q8WWI5 657 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 MTMR11A4FU01 709 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 CD8B2A6NJW9 211 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 MMP20O60882 483 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 TMEM225BP0DP42 221 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 CD8BP10966 210 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 ANXA8P13928 327 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 PRKACGP22612 351 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 FMO1Q01740 532 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 HOXB13Q92826 284 aaPredicted RBP11.91□□□□□ -0.5
SMU1-201ENST00000397149 RAB11FIP5Q9BXF6 653 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 SLC2A8Q9NY64 477 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 ABRACLQ9P1F3 81 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 IRF6O14896 467 aa11.91□□□□□ -0.5
SMU1-201ENST00000397149 SCGB1D1O95968 90 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms