RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TLCD2A6NGC4 264 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 SLC9B1P1A6NJY1 282 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 SAP18O00422 153 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 ATP5HO75947 161 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CBX6O95503 412 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 NTRK1P04629 796 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 G6PDP11413 515 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 PRPS2P11908 318 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 BCKDHAP12694 445 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 ACPPP15309 386 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 ST6GAL1P15907 406 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 PCSK2P16519 638 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 POLE2P56282 527 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 FOXK1P85037 733 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 RGS1Q08116 209 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 TBL3Q12788 808 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 SQSTM1Q13501 440 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 KIAA0040Q15053 153 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 MAPRE2Q15555 327 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 PDCD4Q53EL6 469 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 TMEM35AQ53FP2 167 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 AGKQ53H12 422 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 DEPDC1Q5TB30 811 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 FBXO42Q6P3S6 717 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 PAOXQ6QHF9 649 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CYP20A1Q6UW02 462 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 ASPGQ86U10 573 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 C19orf47Q8N9M1 422 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 RCBTB1Q8NDN9 531 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CREB3L4Q8TEY5 395 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CHTF18Q8WVB6 975 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 SLC13A3Q8WWT9 602 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 TCTN2Q96GX1 697 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 TRAPPC9Q96Q05 1148 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 F2RL3Q96RI0 385 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 MAP3K3Q99759 626 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 REXO4Q9GZR2 422 aaKnown RBP12.59□□□□□ -0.39
SEC13-209ENST00000397117 ARL8BQ9NVJ2 186 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 CCDC167Q9P0B6 97 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 KLHL3Q9UH77 587 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
SEC13-209ENST00000397117 USP9XQ93008 2570 aaPredicted RBP12.58□□□□□ -0.4
SEC13-209ENST00000397117 HEATR5BQ9P2D3 2071 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 CTSVO60911 334 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 SLC22A3O75751 556 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 SEMA3DO95025 777 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 THRAP10827 490 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 LIFP15018 202 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 GPX3P22352 226 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 CALB2P22676 271 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 PRDX6P30041 224 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
SEC13-209ENST00000397117 MNAT1P51948 309 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 GFERP55789 205 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 STXBP1P61764 594 aaKnown RBP12.58□□□□□ -0.4
SEC13-209ENST00000397117 BNIP1Q12981 228 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 TRA2AQ13595 282 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC13-209ENST00000397117 ZIC1Q15915 447 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 ZC3H12BQ5HYM0 836 aaKnown RBP12.58□□□□□ -0.4
SEC13-209ENST00000397117 WDR74Q6RFH5 385 aaPredicted RBP12.58□□□□□ -0.4
SEC13-209ENST00000397117 PAGE2Q7Z2X7 111 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 CARFQ8N187 725 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 ZNF655Q8N720 491 aaPredicted RBP12.58□□□□□ -0.4
SEC13-209ENST00000397117 RGMAQ96B86 450 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 FCRL4Q96PJ5 515 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 ZBTB18Q99592 522 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 SOHLH2Q9NX45 425 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 ZIM2Q9NZV7 527 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 B3GALT1Q9Y5Z6 326 aa12.58□□□□□ -0.4
SEC13-209ENST00000397117 SPTAN1Q13813 2472 aaKnown RBP12.57□□□□□ -0.4
SEC13-209ENST00000397117 LOC100653049A0A140TA62 436 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 GNG14A0A1W2PPG7 69 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 ARHGAP10A1A4S6 786 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 LRIT2A6NDA9 550 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 KIF1CO43896 1103 aaKnown RBP12.57□□□□□ -0.4
SEC13-209ENST00000397117 PCDH7O60245 1069 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 KRT34O76011 436 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 STATHP02808 62 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 ANXA4P09525 319 aaPredicted RBP12.57□□□□□ -0.4
SEC13-209ENST00000397117 COX4I1P13073 169 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 GP1BBP13224 206 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 CASRP41180 1078 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 ARL4DP49703 201 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 TGM3Q08188 693 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 PWP1Q13610 501 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 CYLC2Q14093 348 aaPredicted RBP12.57□□□□□ -0.4
SEC13-209ENST00000397117 HERC3Q15034 1050 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 RNF44Q7L0R7 432 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 COMMD6Q7Z4G1 85 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 METTL4Q8N3J2 472 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 CAMKVQ8NCB2 501 aa12.57□□□□□ -0.4
SEC13-209ENST00000397117 SRFBP1Q8NEF9 429 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms