RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MYOTQ9UBF9 498 aa7.81□□□□□ -1.16
SCFD1-202ENST00000396629 MTRF1LQ9UGC7 380 aaKnown RBP7.81□□□□□ -1.16
SCFD1-202ENST00000396629 DHRS7Q9Y394 339 aa7.81□□□□□ -1.16
SCFD1-202ENST00000396629 CHD3Q12873 2000 aaKnown RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 TRGV5A0A0B4J1U4 118 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 ATP6AP2A0A1C7CYW4 349 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 TRBC2A0A5B9 178 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 TUBAL3A6NHL2 446 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CLCA1A8K7I4 914 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 BTNL10A8MVZ5 291 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 G3V3Y1 287 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 H7C1Q1 480 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 OR1F1O43749 312 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 ATP6AP2O75787 350 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 HRGP04196 525 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 NPPBP16860 134 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CCND1P24385 295 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 TBX2Q13207 712 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CUL1Q13616 776 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 AGTRAPQ6RW13 159 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CES3Q6UWW8 571 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 RTL4Q6ZR62 310 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 PRUNE1Q86TP1 453 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 KIF18BQ86Y91 864 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CILP2Q8IUL8 1156 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 SCUBE1Q8IWY4 988 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CCDC170Q8IYT3 715 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 FBXW8Q8N3Y1 598 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 GOLM1Q8NBJ4 401 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 NAXEQ8NCW5 288 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 ATG4AQ8WYN0 398 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 PIP5K1AQ99755 562 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 LIN28AQ9H9Z2 209 aaKnown RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 EIF2B3Q9NR50 452 aaKnown RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 PNO1Q9NRX1 252 aaKnown RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 INTS10Q9NVR2 710 aaKnown RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 ALKBH4Q9NXW9 302 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 TUBA8Q9NY65 449 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 BFARQ9NZS9 450 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 ZNF629Q9UEG4 869 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-202ENST00000396629 VPS9D1Q9Y2B5 631 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 CLDN16Q9Y5I7 305 aa7.8□□□□□ -1.16
SCFD1-202ENST00000396629 A0A1W2PPR1 153 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SYCE3A1L190 88 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 INAFM1C9JVW0 142 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 AP3B1O00203 1094 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 PSMD12O00232 456 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 EIF3FO00303 357 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 LIASO43766 372 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 IFNB1P01574 187 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 BMP5P22003 454 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 CCR8P51685 355 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SORDQ00796 357 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 RGS1Q08116 209 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 NAE1Q13564 534 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SPA17Q15506 151 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 BBS9Q3SYG4 887 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 Q5PR19 223 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 HECTD2Q5U5R9 776 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 KIAA0930Q6ICG6 404 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 ZNF549Q6P9A3 640 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 PRSS57Q6UWY2 283 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 PIWIL4Q7Z3Z4 852 aaKnown RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 MAATS1Q7Z4T9 603 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 CA13Q8N1Q1 262 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 TNIP2Q8NFZ5 429 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 LINC01560Q8TB33 94 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 KCNJ9Q92806 393 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SCYL1Q96KG9 808 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SGCZQ96LD1 299 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 HAUS8Q9BT25 410 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 BDH2Q9BUT1 245 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 FRMD8P1Q9BZ68 369 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SACM1LQ9NTJ5 587 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SAMD15Q9P1V8 674 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 PAK5Q9P286 719 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 AMFRQ9UKV5 643 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SOX13Q9UN79 622 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 PDE10AQ9Y233 779 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 ATG4BQ9Y4P1 393 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 GRID2IPA4D2P6 1211 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 TGFBR3LH3BV60 316 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 EPPINO95925 133 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 MGAT1P26572 445 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 TIMP3P35625 211 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 AHRP35869 848 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SCTRP47872 440 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 DNASE1L1P49184 302 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 HK2P52789 917 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 FAM47EQ6ZV65 393 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 UBL4BQ8N7F7 174 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 CD200R1Q8TD46 325 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 RHBGQ9H310 441 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SEMA4BQ9NPR2 832 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 SYBUQ9NX95 663 aa7.79□□□□□ -1.16
SCFD1-202ENST00000396629 TRMT1Q9NXH9 659 aaKnown RBP7.79□□□□□ -1.16
SCFD1-202ENST00000396629 ZFP69BQ9UJL9 534 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms