RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TSPAN10Q9H1Z9 355 aaPredicted RBP17.12■□□□□ 0.33
FXN-203ENST00000396366 EHD1Q9H4M9 534 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 PNO1Q9NRX1 252 aaKnown RBP17.12■□□□□ 0.33
FXN-203ENST00000396366 CACNA1DQ01668 2161 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 HMX2A2RU54 273 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 UBXN8O00124 270 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 B3GALT2O43825 422 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 SH3BGRLO75368 114 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 MYO1DO94832 1006 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 S100BP04271 92 aaPredicted RBP17.11■□□□□ 0.33
FXN-203ENST00000396366 CERS1P27544 350 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 STX2P32856 288 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 RAB38P57729 211 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 MLF1P58340 268 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
FXN-203ENST00000396366 ABHD17CQ6PCB6 329 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 GALNTL5Q7Z4T8 443 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 UBE3DQ7Z6J8 389 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 CLNKQ7Z7G1 428 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 ZNF227Q86WZ6 799 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 SCUBE1Q8IWY4 988 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 THAP3Q8WTV1 239 aaPredicted RBP17.11■□□□□ 0.33
FXN-203ENST00000396366 KCTD4Q8WVF5 259 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 RELTQ969Z4 430 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 ATOH8Q96SQ7 321 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 NPLQ9BXD5 320 aaPredicted RBP17.11■□□□□ 0.33
FXN-203ENST00000396366 PRDM7Q9NQW5 492 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 PRTFDC1Q9NRG1 225 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 ZDHHC18Q9NUE0 388 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 LRFN1Q9P244 771 aa17.11■□□□□ 0.33
FXN-203ENST00000396366 TRGV8A0A0C4DH27 118 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 A0A1B0GUH1 482 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SUPT3HB4E1H0 165 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 ZNHIT1O43257 154 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SUPT3HO75486 399 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SP1P08047 785 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 LTA4HP09960 611 aaKnown RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 CD46P15529 392 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 CRABP2P29373 138 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 EEF1DP29692 281 aaKnown RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 LIM2P55344 173 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 IRF8Q02556 426 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SLC13A2Q13183 592 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 MROH9Q5TGP6 573 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SLC25A25Q6KCM7 469 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 TBC1D1Q86TI0 1168 aaPredicted RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 APCDD1LQ8NCL9 501 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 ARMC2Q8NEN0 867 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SREK1Q8WXA9 508 aaKnown RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 EFCAB11Q9BUY7 163 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 PITHD1Q9GZP4 211 aaPredicted RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 NMRAL1Q9HBL8 299 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 NUDT4Q9NZJ9 180 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 SH3BGRL2Q9UJC5 107 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 ZNF223Q9UK11 482 aaPredicted RBP17.1■□□□□ 0.33
FXN-203ENST00000396366 MMACHCQ9Y4U1 282 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 PCDHGB6Q9Y5F9 930 aa17.1■□□□□ 0.33
FXN-203ENST00000396366 TRBV11-1A0A0K0K1C0 115 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 RTCAO00442 366 aaKnown RBP17.09■□□□□ 0.33
FXN-203ENST00000396366 CYR61O00622 381 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 GSTM2P28161 218 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 MSH2P43246 934 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 PER3P56645 1201 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 HSD17B7P56937 341 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 MAPKAPK3Q16644 382 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 C8orf74Q6P047 294 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 TRIM40Q6P9F5 258 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 C16orf47Q6ZP98 133 aaPredicted RBP17.09■□□□□ 0.33
FXN-203ENST00000396366 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
FXN-203ENST00000396366 LGI4Q8N135 537 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 RNF175Q8N4F7 328 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 B3GNT7Q8NFL0 401 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 SEC16BQ96JE7 1060 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 SERINC2Q96SA4 455 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 DEFB126Q9BYW3 111 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 LIN28AQ9H9Z2 209 aaKnown RBP17.09■□□□□ 0.33
FXN-203ENST00000396366 KCMF1Q9P0J7 381 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 DAPP1Q9UN19 280 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 ACOT9Q9Y305 439 aa17.09■□□□□ 0.33
FXN-203ENST00000396366 LRRC14BA6NHZ5 514 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 NPIPA5E9PKD4 350 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 SAP18O00422 153 aaKnown RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 PRKNO60260 465 aaPredicted RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 KERAO60938 352 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 URI1O94763 535 aaPredicted RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 C2P06681 752 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 PCNAP12004 261 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 MTHFD2P13995 350 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 CASP2P42575 452 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 GPR143P51810 404 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 MTTPP55157 894 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 NAB1Q13506 487 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 LAPTM5Q13571 262 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 TBCCQ15814 346 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 UAP1Q16222 522 aaPredicted RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 HIST2H2ACQ16777 129 aaPredicted RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 RNFT1Q5M7Z0 435 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 HIST2H2AA3Q6FI13 130 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms