RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CTSL3PQ5NE16 218 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 TSTD2Q5T7W7 516 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 RTL4Q6ZR62 310 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 ASPGQ86U10 573 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 KATNAL2Q8IYT4 538 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 LRRC25Q8N386 305 aaPredicted RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 FBXO15Q8NCQ5 510 aaPredicted RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 GSDMBQ8TAX9 411 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 ACTL9Q8TC94 416 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC13A3Q8WWT9 602 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 NCLNQ969V3 563 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 PRDM14Q9GZV8 571 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 LRRC40Q9H9A6 602 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 ABHD10Q9NUJ1 306 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 C6orf203Q9P0P8 240 aaPredicted RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 SH2B3Q9UQQ2 575 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 EIF3LQ9Y262 564 aaKnown RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 LRRC3CA6NJW4 275 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 CD8B2A6NJW9 211 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 EEF1E1-BLOC1S5C9J1V9 151 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 TGFBR3LH3BV60 316 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 EEF1E1O43324 174 aaKnown RBP12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 ZFAND5O76080 213 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 MYO1DO94832 1006 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 METTL18O95568 372 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 B3GALT4O96024 378 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 HYAL2Q12891 473 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 ODF2Q5BJF6 829 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 C10orf62Q5T681 223 aaPredicted RBP12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 ZNF662Q6ZS27 426 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 FAM47EQ6ZV65 393 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 CCDC50Q8IVM0 306 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 SGCZQ96LD1 299 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 BIRC8Q96P09 236 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 RBM24Q9BX46 236 aaKnown RBP12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 FAM129AQ9BZQ8 928 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 SLC6A15Q9H2J7 730 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 UBTD1Q9HAC8 227 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 PROK2Q9HC23 129 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 ZFATQ9P243 1243 aa12.58□□□□□ -0.4
VCPKMT-201ENST00000395859 PRKDCP78527 4128 aaKnown RBP12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 ZNF839A8K0R7 811 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 RBP3P10745 1247 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 TNNT1P13805 278 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 ALOX12P18054 663 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 THBS2P35442 1172 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 MARCKSL1P49006 195 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 TCEAL1Q15170 157 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 PARP6Q2NL67 630 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 DEFB134Q4QY38 66 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 FASTKD1Q53R41 847 aaKnown RBP12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 CAPN13Q6MZZ7 669 aaPredicted RBP12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 TMEM139Q8IV31 216 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 CDKL3Q8IVW4 592 aaPredicted RBP12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 SCUBE1Q8IWY4 988 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 HSPBAP1Q96EW2 488 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 TIMP4Q99727 224 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 SACM1LQ9NTJ5 587 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 QPCTLQ9NXS2 382 aa12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.57□□□□□ -0.4
VCPKMT-201ENST00000395859 AKR1B10O60218 316 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 IPO7O95373 1038 aaKnown RBP12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 CCDC175P0C221 793 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 IMPA1P29218 277 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 PPARGP37231 505 aaPredicted RBP12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 MC3RP41968 323 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 SKIV2L2P42285 1042 aaKnown RBP12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 PCYT1AP49585 367 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 TTPAP49638 278 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 HK2P52789 917 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 TERF1P54274 439 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 NR1H2P55055 460 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 EIF3BP55884 814 aaKnown RBP12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 KCNJ11Q14654 390 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 ACSBG2Q5FVE4 666 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 AARS2Q5JTZ9 985 aaKnown RBP12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 MEI1Q5TIA1 1274 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 LRRC6Q86X45 466 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 RCOR2Q8IZ40 523 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 MFSD9Q8NBP5 474 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 OR6P1Q8NGX9 317 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 ROBO4Q8WZ75 1007 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 LRRC45Q96CN5 670 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 FERMT1Q9BQL6 677 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 HEMGNQ9BXL5 484 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 EXO5Q9H790 373 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 CLK4Q9HAZ1 481 aaKnown RBP12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 GALPQ9UBC7 116 aa12.56□□□□□ -0.4
VCPKMT-201ENST00000395859 NINQ8N4C6 2090 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 WWP2O00308 870 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 CASKO14936 926 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 SLC35G6P0C7Q6 338 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms