RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 IGHEP01854 428 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 FHP07954 510 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 PTX3P26022 381 aaPredicted RBP15.61■□□□□ 0.09
CXCL1-201ENST00000395761 ALDH3A1P30838 453 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 NAA20P61599 178 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 TGM3Q08188 693 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 LCP2Q13094 533 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 LY6DQ14210 128 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 MINDY4Q4G0A6 757 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 MFSD4BQ5TF39 518 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 HHATQ5VTY9 493 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 LIPMQ5VYY2 423 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 GPRIN3Q6ZVF9 776 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 AMER2Q8N7J2 671 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 OR6Y1Q8NGX8 325 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 TBC1D20Q96BZ9 403 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 ARHGAP9Q9BRR9 750 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 TBCDQ9BTW9 1192 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 MECRQ9BV79 373 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 GATA5Q9BWX5 397 aaPredicted RBP15.61■□□□□ 0.09
CXCL1-201ENST00000395761 ING2Q9H160 280 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 CLK4Q9HAZ1 481 aaKnown RBP15.61■□□□□ 0.09
CXCL1-201ENST00000395761 TRPS1Q9UHF7 1281 aa15.61■□□□□ 0.09
CXCL1-201ENST00000395761 MANBAO00462 879 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 ATXN7O15265 892 aaPredicted RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 B3GALT2O43825 422 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 ALOX12BO75342 701 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 MLYCDO95822 493 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 PDYNP01213 254 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 CHN1P15882 459 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 ATP5A1P25705 553 aaKnown RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 MTTPP55157 894 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 BTG2P78543 158 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 PHEXP78562 749 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 ASPHQ12797 758 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 IFT88Q13099 833 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 CFAP157Q5JU67 520 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 FRMD7Q6ZUT3 714 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 NUDCD3Q8IVD9 361 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 APLFQ8IW19 511 aaPredicted RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 SRFBP1Q8NEF9 429 aaKnown RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 OR11G2Q8NGC1 345 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 FAM76AQ8TAV0 307 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 AGAP11Q8TF27 550 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 NACC2Q96BF6 587 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 MAGEB10Q96LZ2 347 aaPredicted RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 IP6K3Q96PC2 410 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 KCNC2Q96PR1 638 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 OR1F2PQ96R84 312 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 KCNA7Q96RP8 456 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 SERINC2Q96SA4 455 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 ELOVL6Q9H5J4 265 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 COPS7BQ9H9Q2 264 aaPredicted RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 MID1IP1Q9NPA3 183 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 INTS9Q9NV88 658 aaKnown RBP15.6■□□□□ 0.09
CXCL1-201ENST00000395761 PSD3Q9NYI0 1048 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 FBXL4Q9UKA2 621 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 ATMQ13315 3056 aa15.6■□□□□ 0.09
CXCL1-201ENST00000395761 PIEZO2Q9H5I5 2752 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 A0A088AWK7 358 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 PLPP1O14494 284 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 ESRRBO95718 433 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 RNH1P13489 461 aaKnown RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 ZNF10P21506 573 aaPredicted RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 IL10P22301 178 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 CCL11P51671 97 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 RAP1GDS1P52306 607 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 FOXA1P55317 472 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 LIM2P55344 173 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 PKNOX1P55347 436 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 RHAGQ02094 409 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 EEF1A2Q05639 463 aaKnown RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 CUL3Q13618 768 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 AP5B1Q2VPB7 878 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 SOWAHCQ53LP3 525 aaPredicted RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 DCAF10Q5QP82 559 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 OR4C11Q6IEV9 310 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 TMEM205Q6UW68 189 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 LANCL3Q6ZV70 420 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 MED25Q71SY5 747 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 ACOT4Q8N9L9 421 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 TMEM102Q8N9M5 508 aaPredicted RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 TMEM52Q8NDY8 209 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 METTL6Q8TCB7 284 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 MGARPQ8TDB4 240 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 SELENOMQ8WWX9 145 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 SREK1Q8WXA9 508 aaKnown RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 TSLPQ969D9 159 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 RGMAQ96B86 450 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 WBP1Q96G27 269 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 HBEGFQ99075 208 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 MAPKAP1Q9BPZ7 522 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 NPLQ9BXD5 320 aaPredicted RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 ZNF717Q9BY31 904 aaPredicted RBP15.59■□□□□ 0.09
CXCL1-201ENST00000395761 SHCBP1LQ9BZQ2 653 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 SEMA4CQ9C0C4 833 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 TNFRSF12AQ9NP84 129 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 KCMF1Q9P0J7 381 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 SNX6Q9UNH7 406 aa15.59■□□□□ 0.09
CXCL1-201ENST00000395761 TIMM22Q9Y584 194 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms