RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 FAM220BPB1ANY3 271 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 RNASET2O00584 256 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 OR1F1O43749 312 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 GMNNO75496 209 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 LDOC1O95751 146 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 TBX6O95947 436 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 CHRM5P08912 532 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ZCCHC18P0CG32 403 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 LAMP1P11279 417 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 PIM1P11309 404 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 CKMT1AP12532 417 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 GGT1P19440 569 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ATP6V1C1P21283 382 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 IL10P22301 178 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 PSMA4P25789 261 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 PEBP1P30086 187 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 AHRP35869 848 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ARFIP1P53367 373 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 OR4D2P58180 307 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 DAB2P98082 770 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 TMEM35AQ53FP2 167 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 CALHM3Q86XJ0 350 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ADCY4Q8NFM4 1077 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 OR2T12Q8NG77 320 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 OR6C4Q8NGE1 309 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 OR52E4Q8NGH9 312 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 JPH3Q8WXH2 748 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 NAF1Q96HR8 494 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 CNDP2Q96KP4 475 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 PHF12Q96QT6 1004 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 PANX1Q96RD7 426 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 SLC38A3Q99624 504 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 GORASP2Q9H8Y8 452 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 COPS7BQ9H9Q2 264 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ASXL3Q9C0F0 2248 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 TCRBV5S2A0A599 114 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 FEZF1A0PJY2 475 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 SAP18O00422 153 aaKnown RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 HNRNPRO43390 633 aaKnown RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 KLHL18O94889 574 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 KLK1P06870 262 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 DDX5P17844 614 aaKnown RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 DUSP3P51452 185 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 LIMK1P53667 647 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 KIR2DS3Q14952 304 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 PLCL1Q15111 1095 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 GLYATQ6IB77 296 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 DNAJC14Q6Y2X3 702 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 ANKRD46Q86W74 232 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 TMEM102Q8N9M5 508 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 OR4E2Q8NGC2 313 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 CREB3L4Q8TEY5 395 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 CANT1Q8WVQ1 401 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 RGMAQ96B86 450 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 PKP2Q99959 881 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 SRMSQ9H3Y6 488 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 UCK1Q9HA47 277 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 SLC6A20Q9NP91 592 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 SLC6A13Q9NSD5 602 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 EVA1BQ9NVM1 165 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 FTSJ1Q9UET6 329 aa18.37■□□□□ 0.53
LMNB1-202ENST00000395354 EXO1Q9UQ84 846 aaKnown RBP18.37■□□□□ 0.53
LMNB1-202ENST00000395354 EME2A4GXA9 379 aaPredicted RBP18.36■□□□□ 0.53
LMNB1-202ENST00000395354 FAM221BA6H8Z2 402 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 EVPLLA8MZ36 301 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 PLPP1O14494 284 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 CAPN5O15484 640 aaPredicted RBP18.36■□□□□ 0.53
LMNB1-202ENST00000395354 TBX19O60806 448 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 CBFA2T3O75081 653 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 FURINP09958 794 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 CKMT2P17540 419 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 PPIBP23284 216 aaKnown RBP18.36■□□□□ 0.53
LMNB1-202ENST00000395354 TPP2P29144 1249 aaPredicted RBP18.36■□□□□ 0.53
LMNB1-202ENST00000395354 BSGP35613 385 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 CDKN2CP42773 168 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ABHD18Q0P651 414 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ZIC1Q15915 447 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 GTDC1Q4AE62 458 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 CCNYL2Q5T2Q4 361 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ZNF425Q6IV72 752 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 GUSBP11Q6P575 273 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ADCK2Q7Z695 626 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ADGRF3Q8IZF5 1079 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 LILRA2Q8N149 483 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 NATD1Q8N6N6 113 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 PAPD5Q8NDF8 572 aaKnown RBP18.36■□□□□ 0.53
LMNB1-202ENST00000395354 OR10A6Q8NH74 314 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 MIEF2Q96C03 454 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 NSMCE2Q96MF7 247 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ZNF717Q9BY31 904 aaPredicted RBP18.36■□□□□ 0.53
LMNB1-202ENST00000395354 IKZF5Q9H5V7 419 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 SPHK1Q9NYA1 384 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 AP1M2Q9Y6Q5 423 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 RP1P56715 2156 aa18.36■□□□□ 0.53
LMNB1-202ENST00000395354 ELOVL7A1L3X0 281 aa18.35■□□□□ 0.53
LMNB1-202ENST00000395354 ISM1B1AKI9 464 aa18.35■□□□□ 0.53
LMNB1-202ENST00000395354 NDUFS4O43181 175 aa18.35■□□□□ 0.53
LMNB1-202ENST00000395354 LCMT2O60294 686 aaKnown RBP18.35■□□□□ 0.53
LMNB1-202ENST00000395354 SCELO95171 688 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms