RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 TMEM35AQ53FP2 167 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 SGO1Q5FBB7 561 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 ZC3H12BQ5HYM0 836 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 PWWP2BQ6NUJ5 590 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 TLDC1Q6P9B6 456 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 YTHDF3Q7Z739 585 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 TRIM73Q86UV7 250 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 FUNDC1Q8IVP5 155 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 DDIASQ8IXT1 998 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.05□□□□□ -1.123e-6■■■■■ 69.6
HERC4-203ENST00000395185 RNF175Q8N4F7 328 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 GALNT6Q8NCL4 622 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 TRPV3Q8NET8 790 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 SNRNP27Q8WVK2 155 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 TUBGCP3Q96CW5 907 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 MTFMTQ96DP5 389 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 CLIP3Q96DZ5 547 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 WBP1Q96G27 269 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 APIPQ96GX9 242 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 RILPQ96NA2 401 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 CATSPER2Q96P56 530 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 HBEGFQ99075 208 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 MTERF1Q99551 399 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 SERPINI1Q99574 410 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 C17orf62Q9BQA9 187 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 GPR87Q9BY21 358 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 FAM117AQ9C073 453 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 ABCF3Q9NUQ8 709 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 MRGBPQ9NV56 204 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 AIG1Q9NVV5 245 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 NMRK1Q9NWW6 199 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 GIMAP2Q9UG22 337 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 ADAM29Q9UKF5 820 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 TRIM33Q9UPN9 1127 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 PLCL2Q9UPR0 1127 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 WBP11Q9Y2W2 641 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 TMED5Q9Y3A6 229 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 FIS1Q9Y3D6 152 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 COPG1Q9Y678 874 aaKnown RBP8.05□□□□□ -1.12
HERC4-203ENST00000395185 SPEGQ15772 3267 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 ACACBO00763 2458 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 UNC13CQ8NB66 2214 aa8.05□□□□□ -1.12
HERC4-203ENST00000395185 SEC16AO15027 2179 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 URB1O60287 2271 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 LOC105369274A0A096LPK9 316 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 LOC102723532A0A0G2JNH3 316 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 C21orf140B9A014 251 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 TMEM150CB9EJG8 249 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 E9PBE3 544 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 ERVH48-1M5A8F1 160 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 EBAG9O00559 213 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 HCRTR1O43613 425 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 OR1F1O43749 312 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 KLHL41O60662 606 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 SRPX2O60687 465 aaPredicted RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 OR2B3O76000 313 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 NTRK1P04629 796 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 ITGB2P05107 769 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 BCKDHAP12694 445 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 IDO1P14902 403 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 LIFP15018 202 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 PVRP15151 417 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 TCN2P20062 427 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 PRDX6P30041 224 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 GRK3P35626 688 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 DLSTP36957 453 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 CLDN8P56748 225 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 KLF10Q13118 480 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 COL9A2Q14055 689 aaPredicted RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 HERC3Q15034 1050 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 RBBP5Q15291 538 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 GPR19Q15760 415 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 PRTGQ2VWP7 1150 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 ATP6AP1LQ52LC2 224 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 PDCD4Q53EL6 469 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 LACTB2Q53H82 288 aaPredicted RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 IL23RQ5VWK5 629 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 KHDRBS2Q5VWX1 349 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 VASH2Q86V25 355 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 MYLK4Q86YV6 388 aaPredicted RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 PLD3Q8IV08 490 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 MCATQ8IVS2 390 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 RIMKLAQ8IXN7 391 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 OR4N4Q8N0Y3 316 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 C19orf47Q8N9M1 422 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 PROKR1Q8TCW9 393 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 TSPEARQ8WU66 669 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 MR1Q95460 341 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 MS4A6EQ96DS6 147 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 SLC45A3Q96JT2 553 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 PPP1R36Q96LQ0 422 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 QRFPRQ96P65 431 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 DPH2Q9BQC3 489 aaPredicted RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 NDC1Q9BTX1 674 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 SPRY4Q9C004 299 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 OR51B5Q9H339 312 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 DDX31Q9H8H2 851 aaKnown RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 ACTR5Q9H9F9 607 aaPredicted RBP8.04□□□□□ -1.12
HERC4-203ENST00000395185 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms