RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 IGSF21Q96ID5 467 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 TAPBPLQ9BX59 468 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 NLNQ9BYT8 704 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 C1GALT1Q9NS00 363 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 AHSPQ9NZD4 102 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 B4GALT6Q9UBX8 382 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FTSJ1Q9UET6 329 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 IQCMA0A1B0GVH7 501 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 SNTNA6NMZ2 147 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 CENPXA8MT69 81 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 TLR4O00206 839 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 YY2O15391 372 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 GCM2O75603 506 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FURINP09958 794 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 OSMP13725 252 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 UQCRC2P22695 453 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 DSTNP60981 165 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 RPS13P62277 151 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 HBA1P69905 142 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 CYP4F2P78329 520 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC7A9P82251 487 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 MRPS15P82914 257 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 NDUFA9Q16795 377 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ZFP69Q49AA0 526 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 REEP3Q6NUK4 255 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ERAP2Q6P179 960 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 Q6ZPB1 254 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 TSEN54Q7Z6J9 526 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ATCAYQ86WG3 371 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 TMEM173Q86WV6 379 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 OR52J3Q8NH60 311 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 BCL7CQ8WUZ0 217 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 TRIM63Q969Q1 353 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 KIAA1143Q96AT1 154 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ASPNQ9BXN1 380 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 UCK2Q9BZX2 261 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC22A4Q9H015 551 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FZD3Q9NPG1 666 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 DDX28Q9NUL7 540 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 NDOR1Q9UHB4 597 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 KCND3Q9UK17 655 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 CFAP20Q9Y6A4 193 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 CEP350Q5VT06 3117 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 A0A1W2PQ45 241 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 A0A1W2PQY0 241 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 TRBC2A0A5B9 178 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 TMEM229AB2RXF0 380 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 WASH3PC4AMC7 463 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF670-ZNF695F2Z2N8 137 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 FAAHO00519 579 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 MYL12BO14950 172 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 RGS5O15539 181 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 C6orf47O95873 294 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 LGI1O95970 557 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 OPN1SWP03999 348 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 CKMP06732 381 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 TNFSF8P32971 234 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 GRK5P34947 590 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 HTR3AP46098 478 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 MVDP53602 400 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 MLLT11Q13015 90 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 ILKQ13418 452 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 SPHARQ15513 63 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 SLCO4C1Q6ZQN7 724 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 LAS2Q8IYD9 372 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 SIMC1Q8NDZ2 872 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 GPR156Q8NFN8 814 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 OR8J1Q8NGP2 316 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 AP3S1Q92572 193 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 ZCCHC2Q9C0B9 1178 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 NMNAT1Q9HAN9 279 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC25A19Q9HC21 320 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 EXOSC4Q9NPD3 245 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 ITM2CQ9NQX7 267 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 CMAHPQ9Y471 501 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 INSL5Q9Y5Q6 135 aa9.61□□□□□ -0.87
UBE2D3-208ENST00000394803 COL4A6Q14031 1691 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 A0A1W2PRB8 838 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 IL1AP01583 271 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 SPNP16150 400 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 CD70P32970 193 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 SOAT1P35610 550 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 GSTM5P46439 218 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 OR1E2P47887 323 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 PRLHRP49683 370 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 EEF1A2Q05639 463 aaKnown RBP9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 C2orf80Q0P641 193 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 CNTN1Q12860 1018 aa9.6□□□□□ -0.87
UBE2D3-208ENST00000394803 SF3B4Q15427 424 aaKnown RBP eCLIP9.6□□□□□ -0.873e-70■■■■■ 60.5
UBE2D3-208ENST00000394803 OCLNQ16625 522 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms