RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 FGF18O76093 207 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 TP53P04637 393 aaPredicted RBP14.9□□□□□ -0.02
PTBP1-204ENST00000394601 LAMP1P11279 417 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 POU2F1P14859 743 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 CASP9P55211 416 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 DOC2AQ14183 400 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 TIGD6Q17RP2 521 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 VMACQ2NL98 169 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 NLRP8Q86W28 1048 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 A0A0X1KG70 313 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 ABHD14A-ACY1A0A1B0GW23 586 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 NEDD8-MDP1E9PL57 170 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 I3L521 148 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 LEFTY1O75610 366 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 NAT2P11245 290 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 ZNF30P17039 623 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 KCNC3Q14003 757 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 THOC6Q86W42 341 aaKnown RBP14.9□□□□□ -0.02
PTBP1-204ENST00000394601 RASGEF1AQ8N9B8 481 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 OR8H1Q8NGG4 311 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 VANGL1Q8TAA9 524 aaPredicted RBP14.9□□□□□ -0.02
PTBP1-204ENST00000394601 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 MED30Q96HR3 178 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 C7orf34Q96L11 122 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 GPATCH2Q9NW75 528 aa14.9□□□□□ -0.02
PTBP1-204ENST00000394601 STOX2Q9P2F5 926 aaPredicted RBP14.9□□□□□ -0.02
PTBP1-204ENST00000394601 PRRC2BQ5JSZ5 2229 aaKnown RBP14.9□□□□□ -0.02
PTBP1-204ENST00000394601 SLC5A10A0PJK1 596 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 H3BM21 787 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 FPGTO14772 594 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 HIST1H2AGP0C0S8 130 aaPredicted RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 PSKH1P11801 424 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 HIST1H2ADP20671 130 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 CYP2A7P20853 494 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 VIPR1P32241 457 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OR3A3P47888 321 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 EPHA5P54756 1037 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 PRMT2P55345 433 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 ZNF33BQ06732 778 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 IL18R1Q13478 541 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 NFE2L1Q14494 772 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 CBLL1Q75N03 491 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 CAMKMTQ7Z624 323 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 NELL1Q92832 810 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 HIST1H2AHQ96KK5 128 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 ZNF300Q96RE9 604 aaPredicted RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 MTERF1Q99551 399 aaKnown RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 HIST1H2AJQ99878 128 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 H2AFJQ9BTM1 129 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 FAM83DQ9H4H8 585 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 ZC4H2Q9NQZ6 224 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 PDP1Q9P0J1 537 aaPredicted RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 VPS29Q9UBQ0 182 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 RNF6Q9Y252 685 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 MUC22E2RYF6 1773 aaPredicted RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OR2AG2A6NM03 316 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 SPINT1O43278 529 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 ARHGEF9O43307 516 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 TLL1O43897 1013 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 PRMT3O60678 531 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 AP2A2O94973 939 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 NUDT7P0C024 238 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 JUNDP17535 347 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 MAPK1P28482 360 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 IMPA1P29218 277 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 MVDP53602 400 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 BRAT1Q6PJG6 821 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OTOP2Q7RTS6 562 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 HORMAD1Q86X24 394 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 TRAM1L1Q8N609 369 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OR52J3Q8NH60 311 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.89□□□□□ -0.035e-55■■■■■ 34.1
PTBP1-204ENST00000394601 MSANTD3Q96H12 275 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 TPD52L3Q96J77 140 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 SIGLEC11Q96RL6 698 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 ACOT13Q9NPJ3 140 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 FBXL12Q9NXK8 326 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 SLC25A13Q9UJS0 675 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 SAMD4AQ9UPU9 718 aaKnown RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 CLCA3PQ9Y6N3 262 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 GABRR3A8MPY1 467 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 CCL16O15467 120 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 TSPAN6O43657 245 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 NOS1APO75052 506 aaPredicted RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 LRG1P02750 347 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 HOXB6P17509 224 aaKnown RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 KDELR2P33947 212 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 GRK5P34947 590 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 BTBD16Q32M84 506 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 UAP1L1Q3KQV9 507 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OR2T5Q6IEZ7 315 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 GRHL2Q6ISB3 625 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 FAM9CQ8IZT9 166 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 PAF1Q8N7H5 531 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OR2T29Q8NH02 315 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 OR56A3Q8NH54 315 aa14.89□□□□□ -0.03
PTBP1-204ENST00000394601 SKA2Q8WVK7 121 aaPredicted RBP14.89□□□□□ -0.03
PTBP1-204ENST00000394601 IRF7Q92985 503 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms