RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CSHL1Q14406 222 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 CRYMQ14894 314 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 PPP1R3AQ16821 1122 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 TOR1AIP1Q5JTV8 583 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 SBSNQ6UWP8 590 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 TMPRSS11BQ86T26 416 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 CNTN4Q8IWV2 1026 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 GPALPP1Q8IXQ4 340 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 TMEM52Q8NDY8 209 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 TRPV3Q8NET8 790 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 CREB3L4Q8TEY5 395 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 TTYH2Q9BSA4 534 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 SLC17A6Q9P2U8 582 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 YARS2Q9Y2Z4 477 aaKnown RBP14.28□□□□□ -0.12
CHMP3-202ENST00000393773 FREM3P0C091 2139 aa14.27□□□□□ -0.12
CHMP3-202ENST00000393773 OR14I1A6ND48 311 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 URADA6NGE7 173 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 A8MVJ9 347 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 OR2J2O76002 312 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 OR6B1O95007 311 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 IGHG3P01860 377 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 SERPINA6P08185 405 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 ENO2P09104 434 aaPredicted RBP14.27□□□□□ -0.13
CHMP3-202ENST00000393773 CCDC175P0C221 793 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 GLI4P10075 376 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 ACVR2AP27037 513 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 PPIAP62937 165 aaKnown RBP14.27□□□□□ -0.13
CHMP3-202ENST00000393773 FOLH1Q04609 750 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 GXYLT1Q4G148 440 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 XKR6Q5GH73 641 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 RTL6Q6ICC9 239 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 PAOXQ6QHF9 649 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 CLYBLQ8N0X4 340 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 NAT8LQ8N9F0 302 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 OR5M9Q8NGP3 310 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 ATL1Q8WXF7 558 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 GAL3ST3Q96A11 431 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 SMC6Q96SB8 1091 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 LIN28AQ9H9Z2 209 aaKnown RBP14.27□□□□□ -0.13
CHMP3-202ENST00000393773 ADAP2Q9NPF8 381 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 DLL4Q9NR61 685 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 PNO1Q9NRX1 252 aaKnown RBP14.27□□□□□ -0.13
CHMP3-202ENST00000393773 CCM2LQ9NUG4 571 aaPredicted RBP14.27□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF358Q9NW07 568 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 HPF1Q9NWY4 346 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 ERVK-11Q9UQG0 969 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 EXPH5Q8NEV8 1989 aa14.27□□□□□ -0.13
CHMP3-202ENST00000393773 A0A0G2JNJ9 132 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 A0A1B0GVC2 190 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 FIGNL2A6NMB9 653 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 G3V3Y1 287 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 BCKDKO14874 412 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 CTAG2O75638 210 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 GUCA1CO95843 209 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 PGAM1P18669 254 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 KLK2P20151 261 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 CDC25BP30305 580 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 HNRNPH1P31943 449 aaKnown RBP14.26□□□□□ -0.13
CHMP3-202ENST00000393773 SOX3P41225 446 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 HSD17B7P56937 341 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 IL2P60568 153 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 PLGLB1Q02325 96 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 RUNX2Q13950 521 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 B3GNT6Q6ZMB0 384 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 RGS9BPQ6ZS82 235 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHMP3-202ENST00000393773 MMP21Q8N119 569 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 CHDHQ8NE62 594 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-202ENST00000393773 ASB15Q8WXK1 588 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 RASL10BQ96S79 203 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 AIF1LQ9BQI0 150 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 CCDC77Q9BR77 488 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 LIME1Q9H400 295 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 DNAJB12Q9NXW2 375 aaKnown RBP14.26□□□□□ -0.13
CHMP3-202ENST00000393773 Q9UFV3 132 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 ST6GALNAC2Q9UJ37 374 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 DYRK1BQ9Y463 629 aa14.26□□□□□ -0.13
CHMP3-202ENST00000393773 A0A0G2JN53 185 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 PABPN1LA6NDY0 278 aaKnown RBP14.25□□□□□ -0.13
CHMP3-202ENST00000393773 ZFAND5O76080 213 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 AHSGP02765 367 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 ADH7P40394 386 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 MAGEA5P43359 124 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 ZFP36L2P47974 494 aaKnown RBP14.25□□□□□ -0.13
CHMP3-202ENST00000393773 RAB38P57729 211 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
CHMP3-202ENST00000393773 BBS9Q3SYG4 887 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 HECTD2Q5U5R9 776 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 NXPE4Q6UWF7 544 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 IL20RBQ6UXL0 311 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 GK5Q6ZS86 529 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 TRILQ7L0X0 811 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 GALNT7Q86SF2 657 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 SLC22A16Q86VW1 577 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 THOC6Q86W42 341 aaKnown RBP14.25□□□□□ -0.13
CHMP3-202ENST00000393773 ZZZ3Q8IYH5 903 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 FAM109AQ8N4B1 249 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 TMEM251Q8N6I4 163 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms