RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ASPHQ12797 758 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 CUL3Q13618 768 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 RCN2Q14257 317 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 LIPMQ5VYY2 423 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 OR4C11Q6IEV9 310 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 TMEM205Q6UW68 189 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 TCP10LQ8TDR4 215 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 C8orf44Q96CB5 159 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 ABHD17AQ96GS6 310 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 FAM111AQ96PZ2 611 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 SERPINI1Q99574 410 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 GSTO2Q9H4Y5 243 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 LANCL2Q9NS86 450 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 SLC17A7Q9P2U7 560 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 C19orf25Q9UFG5 118 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 ZNF225Q9UK10 706 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 G3BP2Q9UN86 482 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 PIEZO2Q9H5I5 2752 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 OR2W5A6NFC9 320 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 RTCAO00442 366 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 CTIFO43310 598 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 TRIM13O60858 407 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 CDC123O75794 336 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 MYZAPP0CAP1 466 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 CREB1P16220 341 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 HIST1H1TP22492 207 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 ATP5A1P25705 553 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 CERS1P27544 350 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 SSR2P43308 183 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 TSFMP43897 325 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 RAB38P57729 211 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 AIMP2Q13155 320 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 SGO1Q5FBB7 561 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 NDUFAF7Q7L592 441 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 C10orf107Q8IVU9 208 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 CDYL2Q8N8U2 506 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 ACOT4Q8N9L9 421 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 C9orf43Q8TAL5 461 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 METTL6Q8TCB7 284 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 ADAMTS18Q8TE60 1221 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 SELENOMQ8WWX9 145 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 PGM2Q96G03 612 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 SLC29A3Q9BZD2 475 aa17.9■□□□□ 0.46
PDLIM7-204ENST00000393546 ATMQ13315 3056 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 LOC102723996A0A087X1L8 192 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 NSG1A0A0A6YYJ2 146 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 A6NL46 340 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 FAM227AF5H4B4 570 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 H3BQF6 201 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 TYROBPO43914 113 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 PRMT3O60678 531 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 HPP00738 406 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 KRT6AP02538 564 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 KRT6BP04259 564 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 HMOX2P30519 316 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 KRT6CP48668 564 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 EFNA3P52797 238 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 LIM2P55344 173 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 RHAGQ02094 409 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 EEF1A2Q05639 463 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 PCLAFQ15004 111 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 NSDHLQ15738 373 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 EXOC3L1Q86VI1 746 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 SREK1Q8WXA9 508 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 ZBTB9Q96C00 473 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 PTCHD1Q96NR3 888 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 MESP1Q9BRJ9 268 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 SLC25A23Q9BV35 468 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 STMN4Q9H169 189 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 SLC25A18Q9H1K4 315 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 LYRM4Q9HD34 91 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 MID1IP1Q9NPA3 183 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 NMRK1Q9NWW6 199 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 AHSPQ9NZD4 102 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 DAPP1Q9UN19 280 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 MRPS33Q9Y291 106 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 SPACA6W5XKT8 324 aa17.89■□□□□ 0.45
PDLIM7-204ENST00000393546 PCSK5Q92824 1860 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 A0A1W2PQ72 361 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 CLDN4O14493 209 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 PLPP1O14494 284 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 KLHL41O60662 606 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 SCELO95171 688 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ESRRBO95718 433 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 PDYNP01213 254 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ENO1P06733 434 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 SOX8P57073 446 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ACTN3Q08043 901 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ABRAXAS2Q15018 415 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 TNFAIP8L3Q5GJ75 292 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF793Q6ZN11 406 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 QSOX2Q6ZRP7 698 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 FRMD7Q6ZUT3 714 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 CPEB2Q7Z5Q1 589 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ANKRD37Q7Z713 158 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 GALNT16Q8N428 558 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 AGAP11Q8TF27 550 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF700Q9H0M5 742 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 BRF2Q9HAW0 419 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF160Q9HCG1 818 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms