RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 METTL8Q9H825 291 aaKnown RBP12.65□□□□□ -0.38
LCA5-202ENST00000392959 C14orf119Q9NWQ9 140 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 HCN3Q9P1Z3 774 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 OARD1Q9Y530 152 aa12.65□□□□□ -0.38
LCA5-202ENST00000392959 LRRN3E7EW58 273 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 FBP2O00757 339 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ZNF208O43345 1280 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ZNF81P51508 661 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 CDKN2DP55273 166 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 ZNF252P-AS1Q0IIN9 211 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ABRAXAS2Q15018 415 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MAPK14Q16539 360 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 CMTR2Q8IYT2 770 aaKnown RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 PIP5K1AQ99755 562 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 LRRN3Q9H3W5 708 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 POLMQ9NP87 494 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 PNO1Q9NRX1 252 aaKnown RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 SERINC1Q9NRX5 453 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 NDRG2Q9UN36 371 aaKnown RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 WNT6Q9Y6F9 365 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 GLOD5A6NK44 160 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TRIM64CA6NLI5 447 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ZNF726A6NNF4 738 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 A8MUA0 341 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 BOLA2-SMG1P6H3BVE0 249 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TIA1P31483 386 aaKnown RBP eCLIP12.64□□□□□ -0.39
LCA5-202ENST00000392959 GRIA2P42262 883 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MAGEA12P43365 314 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ARSDP51689 593 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 PRKCDQ05655 676 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 CLCA4Q14CN2 919 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 SPHARQ15513 63 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 XKRXQ6PP77 449 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ZNF227Q86WZ6 799 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 KDM1BQ8NB78 822 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 OR52B6Q8NGF0 335 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 GNPDA2Q8TDQ7 276 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 OR5P2Q8WZ92 322 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ITFG2Q969R8 447 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 RTP4Q96DX8 246 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ERVK-11Q9UQG0 969 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 SLC1A7O00341 560 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 FAAHO00519 579 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 SCDO00767 359 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 STSP08842 583 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 HTR1AP08908 422 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 T-ENOLP0DO92 83 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 BMP2P12643 396 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 HSD3B1P14060 373 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 HSD3B2P26439 372 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 DCKP27707 260 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 PSMA6P60900 246 aaKnown RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 GRSF1Q12849 480 aaKnown RBP eCLIP12.64□□□□□ -0.39
LCA5-202ENST00000392959 EXOC3L2Q2M3D2 409 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 NRSN1Q8IZ57 195 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 LNX2Q8N448 690 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TMIEQ8NEW7 156 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 OR4E2Q8NGC2 313 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 OR2L8Q8NGY9 312 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MAPK15Q8TD08 544 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MYRFLQ96LU7 910 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TREM1Q9NP99 234 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 H7BY64 318 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 GRID2O43424 1007 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 ETV4P43268 484 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 MAP2K3P46734 347 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TLE2Q04725 743 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 NFATC3Q12968 1075 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 BTBD16Q32M84 506 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 PSAPL1Q6NUJ1 521 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 IGSF8Q969P0 613 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 RFT1Q96AA3 541 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 PRAP1Q96NZ9 151 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 TRIB3Q96RU7 358 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 GTPBP2Q9BX10 602 aaKnown RBP12.64□□□□□ -0.39
LCA5-202ENST00000392959 MYH11P35749 1972 aa12.64□□□□□ -0.39
LCA5-202ENST00000392959 ZNF878C9JN71 531 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 BLOC1S5-TXNDC5H3BN57 136 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 DHRS4L1P0CG22 281 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 FDXRP22570 491 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 MYF6P23409 242 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 FSHRP23945 695 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 GRK5P34947 590 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 SH3BP2P78314 561 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 PON2Q15165 354 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 ZNF792Q3KQV3 632 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
LCA5-202ENST00000392959 RAB6CQ53S08 254 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms