RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 BTBD9Q96Q07 612 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 CHST8Q9H2A9 424 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 SEMA6AQ9H2E6 1030 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 VCXQ9H320 206 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 TM9SF3Q9HD45 589 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 PRDM7Q9NQW5 492 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 OLAHQ9NV23 265 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 TAS2R9Q9NYW1 312 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 A0A1W2PRB8 838 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 C4orf51C9J302 202 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 PPM1DO15297 605 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 ERI3O43414 337 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 C1QCP02747 245 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 RAP2AP10114 183 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 DRD2P14416 443 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 IL1RNP18510 177 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAGP20916 626 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 HIST1H1TP22492 207 aaPredicted RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 HHEXQ03014 270 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 FAM98BQ52LJ0 330 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 FBXO42Q6P3S6 717 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 TRIM40Q6P9F5 258 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 VN1R4Q7Z5H5 301 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 AMIGO2Q86SJ2 522 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 TRIM73Q86UV7 250 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZZZ3Q8IYH5 903 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 AMER3Q8N944 861 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 AVL9Q8NBF6 648 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAFAQ8NHW3 353 aaPredicted RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 THAP11Q96EK4 314 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 UGT2B28Q9BY64 529 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 DCAF13Q9NV06 445 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 TAS2R7Q9NYW3 318 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 EHD3Q9NZN3 535 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 H0YJX3 145 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 DCNP07585 359 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 FAM58BPP0C7Q3 252 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZNF26P17031 533 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 HOXB6P17509 224 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 FRKP42685 505 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 TGM3Q08188 693 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 SLC9A5Q14940 896 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 RGNQ15493 299 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 VMACQ2NL98 169 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 FCRL6Q6DN72 434 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 MRM1Q6IN84 353 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZCCHC8Q6NZY4 707 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 FIGLAQ6QHK4 219 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ASPGQ86U10 573 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 GKN2Q86XP6 184 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 PTOV1Q86YD1 416 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 NCLNQ969V3 563 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 TM4SF19Q96DZ7 209 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 CENPNQ96H22 339 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 SEPHS2Q99611 448 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 MACROD1Q9BQ69 325 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 SLC35A5Q9BS91 424 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 TRIM4Q9C037 500 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 HRASLS2Q9NWW9 162 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 TEX10Q9NXF1 929 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 PILRAQ9UKJ1 303 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ABCA7Q8IZY2 2146 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 A0A0G2JN53 185 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 B4DGG1 531 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 PDPK1O15530 556 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 GUCY1B2O75343 617 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 STATHP02808 62 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 UQCRBP14927 111 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 BCKDHBP21953 392 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ATP5A1P25705 553 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ALDH9A1P49189 494 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 CCT8P50990 548 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 PCBP4P57723 403 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 NXPH1P58417 271 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 CHRNB3Q05901 458 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 RGS1Q08116 209 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 VEZF1Q14119 521 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ADRM1Q16186 407 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 OOSP2Q86WS3 158 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ACOT4Q8N9L9 421 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 PNPT1Q8TCS8 783 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 NETO1Q8TDF5 533 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 DNASE2BQ8WZ79 361 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 GAL3ST3Q96A11 431 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 RNF145Q96MT1 663 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 FAIM2Q9BWQ8 316 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 CHID1Q9BWS9 393 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 ABCG4Q9H172 646 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 MIR1-1HGQ9H1L0 117 aa10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 GOLGA4Q13439 2230 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-203ENST00000392128 COL6A3P12111 3177 aa10.87□□□□□ -0.67
SMARCAL1-203ENST00000392128 A0A0J9YY10 115 aa10.87□□□□□ -0.67
SMARCAL1-203ENST00000392128 OR5K3A6NET4 321 aa10.87□□□□□ -0.67
SMARCAL1-203ENST00000392128 TPST1O60507 370 aa10.87□□□□□ -0.67
SMARCAL1-203ENST00000392128 CTSVO60911 334 aa10.87□□□□□ -0.67
SMARCAL1-203ENST00000392128 SLC35G6P0C7Q6 338 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms