RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MTG2Q9H4K7 406 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 RNF11Q9Y3C5 154 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 FAAHO00519 579 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 OR1F1O43749 312 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 AMD1P17707 334 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 SLC11A1P49279 550 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 SNTB2Q13425 540 aaKnown RBP18.99■□□□□ 0.63
SHANK1-203ENST00000391813 GINS1Q14691 196 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 OR6K6Q8NGW6 343 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 FAM110BQ8TC76 370 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 PIP5K1AQ99755 562 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 LPIN3Q9BQK8 851 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 RNF39Q9H2S5 420 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 IMP3Q9NV31 184 aaKnown RBP18.99■□□□□ 0.63
SHANK1-203ENST00000391813 FGF18O76093 207 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 RAB5BP61020 215 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 RPL19P84098 196 aaKnown RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SLC39A5Q6ZMH5 540 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 NDNFQ8TB73 568 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF471Q9BX82 626 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SMOC2Q9H3U7 446 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 NENFQ9UMX5 172 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 A0A1B0GVI7 797 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 LRRC72A6NJI9 287 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 VIPP01282 170 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 RB1P06400 928 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 IL3P08700 152 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 CAPN3P20807 821 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 MAPK3P27361 379 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SLBPQ14493 270 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 POM121L1PQ3SYA9 428 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 C1orf189Q5VU69 101 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SLC25A25Q6KCM7 469 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 HFE2Q6ZVN8 426 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 BTN2A1Q7KYR7 527 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 CHDHQ8NE62 594 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D15Q8TC07 691 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF514Q96K75 400 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SCP2D1Q9UJQ7 156 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 MYH2Q9UKX2 1941 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 NUP98P52948 1817 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 DNAJC25-GNG10A0A024R161 153 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 COQ9O75208 318 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 EPHX1P07099 455 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 FGF4P08620 206 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 CKMT1AP12532 417 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 USF2Q15853 346 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 AAK1Q2M2I8 961 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 IQCHQ86VS3 1027 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 GALNT13Q8IUC8 556 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 TRIM43Q96BQ3 446 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 MS4A4AQ96JQ5 239 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 CACNG6Q9BXT2 260 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 NOP16Q9Y3C1 178 aaKnown RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 ASB4Q9Y574 426 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 A0A075B6Q4 140 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SMIM30A4D0T7 59 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 ANKRD66B4E2M5 251 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SCGNO76038 276 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 MPIP34949 423 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 OR3A3P47888 321 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 OR3A2P47893 321 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 AVPR1BP47901 424 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 INHBCP55103 352 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 STXBP1P61764 594 aaKnown RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 C22orf42Q6IC83 251 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 FBXL22Q6P050 247 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 LINC00299Q6ZSB3 139 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 COMMD7Q86VX2 200 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 OR5AK3PQ8NH89 298 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 SHDQ96IW2 340 aa18.98■□□□□ 0.63
SHANK1-203ENST00000391813 NSUN5Q96P11 429 aaKnown RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 NUFIP1Q9UHK0 495 aaKnown RBP18.98■□□□□ 0.63
SHANK1-203ENST00000391813 PCDH17O14917 1159 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 PROM1O43490 865 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 EDNRAP25101 427 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ITPKBP27987 946 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 GDF5P43026 501 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 CEBPGP53567 150 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 FAM189A2Q15884 450 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 PTCHD3Q3KNS1 767 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 TTLQ8NG68 377 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF461Q8TAF7 563 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ARL6Q9H0F7 186 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 NLE1Q9NVX2 485 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 FCF1Q9Y324 198 aaKnown RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 J3KR12 359 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 EEF1E1O43324 174 aaKnown RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 IQCF3P0C7M6 154 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 CSNK2A2P19784 350 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 SLC10A2Q12908 348 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ATXN7L2Q5T6C5 722 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 SPACA7Q96KW9 195 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 BEX1Q9HBH7 125 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 MKKSQ9NPJ1 570 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 GIMD1P0DJR0 217 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 NT5EP21589 574 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 CRHBPP24387 322 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 HSD17B2P37059 387 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 LRP8Q14114 963 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms