RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 ACRV1P26436 265 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 FLT3LGP49771 235 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 MAZP56270 477 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 TBCEQ15813 527 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 GTF2IRD2BQ6EKJ0 949 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 FAM171BQ6P995 826 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 TPRG1Q6ZUI0 275 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 LINGO2Q7L985 606 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 GTF2IRD2Q86UP8 949 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 HMGCLL1Q8TB92 370 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 AKAP1Q92667 903 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 RHNO1Q9BSD3 238 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 TNFRSF10DQ9UBN6 386 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PAPPAQ13219 1627 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRMT3O60678 531 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 CDKN2CP42773 168 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 CRISP3P54108 245 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PPP2R2BQ00005 443 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR8J1Q8NGP2 316 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 EFCAB11Q9BUY7 163 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 TMEM45AQ9NWC5 275 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 MGAT4BQ9UQ53 548 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 I6L893 689 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 GRM6O15303 877 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC16A6O15403 523 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRLP01236 227 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC35G4P0C7Q5 338 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC9A3P48764 834 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 CTSL3PQ5NE16 218 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 ALKAL1Q6UXT8 129 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR6C4Q8NGE1 309 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 MGME1Q9BQP7 344 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 TRMT61BQ9BVS5 477 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 DPAGT1Q9H3H5 408 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 TMEM30AQ9NV96 361 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 IL17CQ9P0M4 197 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF780BQ9Y6R6 833 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 FAM170BA6NMN3 283 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 KDM4BO94953 1096 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 RB1P06400 928 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PSMD4P55036 377 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PTGES3Q15185 160 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 CATSPEREQ5SY80 951 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 IRAK1BP1Q5VVH5 260 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 Q6ZVL8 140 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PHYKPLQ8IUZ5 450 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ABCG5Q9H222 651 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ASB1Q9Y576 335 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 CNTRLQ7Z7A1 2325 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR7A17O14581 309 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 JUPP14923 745 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ATF6P18850 670 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 GMFBP60983 142 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 RGNQ15493 299 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 Q6ZVU0 165 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 GALNT7Q86SF2 657 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 TSPAN33Q86UF1 283 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 DBF4BQ8NFT6 615 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 TNFAIP8L1Q8WVP5 186 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 TXNDC15Q96J42 360 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 FERD3LQ96RJ6 166 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 CPPED1Q9BRF8 314 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 CSNK1G1Q9HCP0 422 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PCDHGA12O60330 932 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ADORA3P0DMS8 318 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 LAMP2P13473 410 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ELNP15502 786 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC35A2P78381 396 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 RING1Q06587 406 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 MICAQ29983 383 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PLAG1Q6DJT9 500 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 NLGN4XQ8N0W4 816 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 SNX33Q8WV41 574 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 ERVW-1Q9UQF0 538 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 COCHO43405 550 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 EOMESO95936 686 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 BPIP17213 487 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 HK3P52790 923 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 RACK1P63244 317 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 SELENOWP63302 87 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRKCDQ05655 676 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 LRRC26Q2I0M4 334 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms