RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 OR9A1PQ8NGU1 263 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 FNDC8Q8TC99 324 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NPY6RQ99463 290 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 MRPS26Q9BYN8 205 aaKnown RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 EFCAB1Q9HAE3 211 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ST14Q9Y5Y6 855 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 UBR3Q6ZT12 1888 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ABCA7Q8IZY2 2146 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 SSC5DA1L4H1 1573 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 FAM166BA8MTA8 275 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 TMEM233B4DJY2 109 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PIAS2O75928 621 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 BCL10O95999 233 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 MT-ND1P03886 318 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NMBRP28336 390 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 SERPINB1P30740 379 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 RRM2P31350 389 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 XCR1P46094 333 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 RPL14P50914 215 aaKnown RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 EFNA3P52797 238 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 CDH13P55290 713 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PPP2CBP62714 309 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 RPL38P63173 70 aaKnown RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PPP2CAP67775 309 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 MPP1Q00013 466 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 TRIM25Q14258 630 aaKnown RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ZIK1Q3SY52 487 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 LIPIQ6XZB0 460 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 FJX1Q86VR8 437 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 WDR5BQ86VZ2 330 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 SNX29P2Q8IUI4 249 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 SLC22A15Q8IZD6 547 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 STX19Q8N4C7 294 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF611Q8N823 705 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 DNAJA3Q96EY1 480 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PDXPQ96GD0 296 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 CDKN2AIPNLQ96HQ2 116 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 TEKT5Q96M29 485 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 SH3GL1Q99961 368 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 B3GAT2Q9NPZ5 323 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 OSGIN2Q9Y236 505 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PCDHGB5Q9Y5G0 923 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ENTPD2Q9Y5L3 495 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 SPIN1Q9Y657 262 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 GLOD5A6NK44 160 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ZBTB42B2RXF5 422 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 C9JVG2 144 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PYCARD-AS1I3L0S3 204 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ARHGEF9O43307 516 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 MAN2A2P49641 1150 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 INAQ16352 499 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 METTL21CQ5VZV1 264 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 FAM91A1Q658Y4 838 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 RPS27LQ71UM5 84 aaKnown RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 TMPRSS12Q86WS5 348 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NUDT13Q86X67 352 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 DENND6AQ8IWF6 608 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 GATSQ8NAP1 163 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 BPIFB6Q8NFQ5 453 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 VRK1Q99986 396 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ZFYVE21Q9BQ24 234 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 DEFB127Q9H1M4 99 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 CRISPLD1Q9H336 500 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 FAM72CH0Y354 149 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 H0YC42 278 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 XKRYO14609 159 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 HDAC3O15379 428 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 KRT8P05787 483 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 CDH1P12830 882 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 GLB1P16278 677 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 PROZP22891 400 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 CXCR1P25024 350 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 RPS9P46781 194 aaKnown RBP6.27□□□□□ -1.4
NEDD9-202ENST00000379446 PRR5P85299 388 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 RELAQ04206 551 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 GPR19Q15760 415 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 GFOD2Q3B7J2 385 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 TSTD2Q5T7W7 516 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 FAM72AQ5TYM5 149 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 CES4AQ5XG92 561 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 FAM72DQ6L9T8 149 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 KDELC1Q6UW63 502 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 KCTD8Q6ZWB6 473 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 FAM72BQ86X60 149 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 TMC8Q8IU68 726 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 SPNS2Q8IVW8 549 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF276Q8N554 614 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 SLC37A2Q8TED4 501 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 CUTCQ9NTM9 273 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 PHF11Q9UIL8 331 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 NXT1Q9UKK6 140 aaKnown RBP6.27□□□□□ -1.4
NEDD9-202ENST00000379446 MCTS1Q9ULC4 181 aaKnown RBP6.27□□□□□ -1.4
NEDD9-202ENST00000379446 PCDHGA11Q9Y5H2 935 aa6.27□□□□□ -1.4
NEDD9-202ENST00000379446 CNOT3O75175 753 aaKnown RBP6.27□□□□□ -1.41
NEDD9-202ENST00000379446 FARS2O95363 451 aaKnown RBP6.27□□□□□ -1.41
NEDD9-202ENST00000379446 TFAP2AP05549 437 aa6.27□□□□□ -1.41
NEDD9-202ENST00000379446 ANXA4P09525 319 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-202ENST00000379446 MTHFD2P13995 350 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms