RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 OR1A2Q9Y585 309 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CEPT1Q9Y6K0 416 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 DMXL1Q9Y485 3027 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 TRBC2A0A5B9 178 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 ENO4A6NNW6 628 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 C2CD4DB7Z1M9 353 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 SAP18O00422 153 aaKnown RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 PLPP1O14494 284 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 NDUFS4O43181 175 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 TNFRSF21O75509 655 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 KLHL18O94889 574 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 FKBP9O95302 570 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 CLIC3O95833 236 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 CEACAM5P06731 702 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 HOXB2P14652 356 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 RYKP34925 604 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 BSGP35613 385 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 GRK3P35626 688 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 IGFALSP35858 605 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 CRATP43155 626 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 SOX9P48436 509 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 MVDP53602 400 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 MAPK12P53778 367 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 ADPRHP54922 357 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 PRDX1Q06830 199 aaKnown RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 KCNAB2Q13303 367 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 HTR4Q13639 388 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 UAP1L1Q3KQV9 507 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 ZIK1Q3SY52 487 aaPredicted RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEM35AQ53FP2 167 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEM196Q5HYL7 178 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 DDX59Q5T1V6 619 aaKnown RBP eCLIP10□□□□□ -0.81
POLR2J3-201ENST00000379340 CWF19L1Q69YN2 538 aaKnown RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 DCP2Q8IU60 420 aaKnown RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 ZC3H7AQ8IWR0 971 aaKnown RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 LMNTD1Q8N9Z9 388 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 OR5P2Q8WZ92 322 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 LZICQ8WZA0 190 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 EZH1Q92800 747 aaPredicted RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 ERLEC1Q96DZ1 483 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 CNDP2Q96KP4 475 aaKnown RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 EPYCQ99645 322 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 DPH2Q9BQC3 489 aaPredicted RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 DOHHQ9BU89 302 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 ACAT2Q9BWD1 397 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 NLNQ9BYT8 704 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 OSGEPL1Q9H4B0 414 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 REEP1Q9H902 201 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 SMURF2Q9HAU4 748 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 NEUROD4Q9HD90 331 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 TRPV5Q9NQA5 729 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 CUEDC1Q9NWM3 386 aaPredicted RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 ANGPT4Q9Y264 503 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 MAGED1Q9Y5V3 778 aaPredicted RBP10□□□□□ -0.81
POLR2J3-201ENST00000379340 NUMA1Q14980 2115 aa10□□□□□ -0.81
POLR2J3-201ENST00000379340 COL4A2P08572 1712 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 GPR179Q6PRD1 2367 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 LOC100130705A0A1B0GUX0 176 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ANHXE9PGG2 379 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 PDPK1O15530 556 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 C9P02748 559 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ARAFP10398 606 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ITGA2P17301 1181 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 EFNA1P20827 205 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 DRD1P21728 446 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 IGFBP5P24593 272 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 RPL10P27635 214 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 NDUFS1P28331 727 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CTHP32929 405 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CHI3L1P36222 383 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 PRIM2P49643 509 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 IST1P53990 364 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CDH15P55291 814 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 SELENOWP63302 87 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CSNK1G2P78368 415 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 MRPS21P82921 87 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 MC1RQ01726 317 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 SCARB2Q14108 478 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 KEAP1Q14145 624 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 KRT33BQ14525 404 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 PLCL1Q15111 1095 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 MLF2Q15773 248 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 BROXQ5VW32 411 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 KIAA1211LQ6NV74 962 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF773Q6PK81 442 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ANGPTL8Q6UXH0 198 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEM179BQ7Z7N9 219 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 NAGSQ8N159 534 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 C2orf73Q8N5S3 287 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ANKRD53Q8N9V6 530 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 IL17RCQ8NAC3 791 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF347Q96SE7 839 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 RPP25Q9BUL9 199 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF717Q9BY31 904 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 AMBRA1Q9C0C7 1298 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC6A16Q9GZN6 736 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms