RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ARHGAP20Q9P2F6 1191 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 MTX2O75431 263 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PRKXP51817 358 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 NPTX1Q15818 432 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 SHDQ96IW2 340 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 KCNH6Q9H252 994 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 CLEC4EQ9ULY5 219 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 HOXB6P17509 224 aaKnown RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 GNAZP19086 355 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ERVK-8P63133 956 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 MUC13Q9H3R2 512 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 IQSEC2Q5JU85 1478 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 F8W036 122 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 H1F0P07305 194 aaKnown RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 RHBDL3P58872 404 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 BLOC1S1P78537 153 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 DSC3Q14574 896 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 GPR155Q7Z3F1 870 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 CMIPQ8IY22 773 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PYCR2Q96C36 320 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PRR11Q96HE9 360 aaPredicted RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PCDHAC2Q9Y5I4 1007 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 A0A1W2PPM1 405 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 MEIS3P2A8K0S8 358 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ARL6IP5O75915 188 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 TFPTP0C1Z6 253 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 DGKGP49619 791 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 CLCNKAP51800 687 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 GAS6Q14393 721 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PARP15Q460N3 678 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 C6orf120Q7Z4R8 191 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 BTN2A3PQ96KV6 586 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 RBM14Q96PK6 669 aaKnown RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 TMEM109Q9BVC6 243 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 KDM5CP41229 1560 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 GLOD5A6NK44 160 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 DNM1LO00429 736 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 RBMS1P29558 406 aaKnown RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 PON2Q15165 354 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 UEVLDQ8IX04 471 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 SLC17A7Q9P2U7 560 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ASB3Q9Y575 518 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 CSNK2A2P19784 350 aaPredicted RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 CEACAM20Q6UY09 585 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 TTLQ8NG68 377 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 FCGR1BQ92637 280 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 RHBDF1Q96CC6 855 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 URM1Q9BTM9 101 aaKnown RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 FAM230AA0A1W2PPH8 454 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 MAS1P04201 325 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 HERVK_113P63132 956 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 EEF1DP3Q658K8 133 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ELP2Q6IA86 826 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 Q8N402 240 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 WDR20Q8TBZ3 569 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 KCTD13Q8WZ19 329 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 HMCESQ96FZ2 354 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 LRIG1Q96JA1 1093 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 SDHAF2Q9NX18 166 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 PCDHGA11Q9Y5H2 935 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 A0A1W2PPV4 95 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 MATN2O00339 956 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 SOCS2O14508 198 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 SF3A2Q15428 464 aaKnown RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 OR51Q1Q8NH59 317 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 PDCD2LQ9BRP1 358 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 COQ10BQ9H8M1 238 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ERVK13-1Q9NX77 482 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ZFR2Q9UPR6 939 aaKnown RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 MED16Q9Y2X0 877 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ALPIP09923 528 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 PTPN2P17706 415 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 AOC1P19801 751 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 GRM5P41594 1212 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 MRPS5P82675 430 aaKnown RBP12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ST6GALNAC5Q9BVH7 336 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 ARL6Q9H0F7 186 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 KLHL13Q9P2N7 655 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 MYH7P12883 1935 aa12.83□□□□□ -0.36
HIPK3-202ENST00000379016 GPR75-ASB3A0A0A6YYF3 556 aa12.82□□□□□ -0.36
HIPK3-202ENST00000379016 C12orf71A8MTZ7 269 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms