RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 FHP07954 510 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 FURINP09958 794 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 UROSP10746 265 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 HIST1H1TP22492 207 aaPredicted RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 OTX2P32243 289 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 SSR2P43308 183 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 FAM69BQ5VUD6 431 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 ZCCHC7Q8N3Z6 543 aaKnown RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 NKIRAS1Q9NYS0 192 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 ADAM29Q9UKF5 820 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 KMT2BQ9UMN6 2715 aaPredicted RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 UQCRHLA0A096LP55 91 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 A0A0G2JN53 185 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 UQCRHP07919 91 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 GRK2P25098 689 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 CERS1P27544 350 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 RAB38P57729 211 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 OLR1P78380 273 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 RUNX2Q13950 521 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SGO1Q5FBB7 561 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 ATP1A1-AS1Q5TC04 95 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 HHATQ5VTY9 493 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 BORAQ6PGQ7 559 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 PPP1R32Q7Z5V6 425 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 MRGPREQ86SM8 312 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 CUZD1Q86UP6 607 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 PRSS58Q8IYP2 241 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 PLPP5Q8NEB5 264 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 ARL8AQ96BM9 186 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 DDX31Q9H8H2 851 aaKnown RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 LANCL2Q9NS86 450 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 DAPP1Q9UN19 280 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 MRPS33Q9Y291 106 aaKnown RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 MAN2B2Q9Y2E5 1009 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SPACA6W5XKT8 324 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 DSPP15924 2871 aaKnown RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 A0A1W2PQ72 361 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 BLACEA4D250 179 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SYNDIG1LA6NDD5 238 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 HMGB1P1B2RPK0 211 aaPredicted RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SAP18O00422 153 aaKnown RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 DNAJB6O75190 326 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SH3BGRLO75368 114 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 ETHE1O95571 254 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SERPINE1P05121 402 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 FGF4P08620 206 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 BSGP35613 385 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 CCR10P46092 362 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 RRADP55042 308 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 LIM2P55344 173 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 DEFB109BQ30KR1 87 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 MINDY4Q4G0A6 757 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 ARL13AQ5H913 290 aaPredicted RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 ZNF793Q6ZN11 406 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 RNF165Q6ZSG1 346 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 PAGE2Q7Z2X7 111 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 NUDT13Q86X67 352 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 APLFQ8IW19 511 aaPredicted RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 METTL4Q8N3J2 472 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 TMEM102Q8N9M5 508 aaPredicted RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 C7orf57Q8NEG2 295 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 APOBEC4Q8WW27 367 aaKnown RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 FER1L6-AS2Q96M78 137 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 VN1R1Q9GZP7 353 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 MS4A12Q9NXJ0 267 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 VPS29Q9UBQ0 182 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 C19orf25Q9UFG5 118 aaPredicted RBP12.49□□□□□ -0.41
CKAP2-202ENST00000378034 SLC12A4Q9UP95 1085 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 TIMM22Q9Y584 194 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 HS3ST3B1Q9Y662 390 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 KCNMB2Q9Y691 235 aa12.49□□□□□ -0.41
CKAP2-202ENST00000378034 TMEM114B3SHH9 223 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 RTCAO00442 366 aaKnown RBP12.48□□□□□ -0.41
CKAP2-202ENST00000378034 SOCS6O14544 535 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 AZIN1O14977 448 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 ALOX12BO75342 701 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 JRKO75564 520 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 FOXL2P58012 376 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 TBR1Q16650 682 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 TCHHL1Q5QJ38 904 aaPredicted RBP12.48□□□□□ -0.41
CKAP2-202ENST00000378034 MFSD4BQ5TF39 518 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 QSOX2Q6ZRP7 698 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 ZCCHC23Q6ZST2 131 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 ZNF595Q8IYB9 648 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 ANKRD42Q8N9B4 389 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 KCNA7Q96RP8 456 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 ZNF717Q9BY31 904 aaPredicted RBP12.48□□□□□ -0.41
CKAP2-202ENST00000378034 LYARQ9NX58 379 aaKnown RBP12.48□□□□□ -0.41
CKAP2-202ENST00000378034 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 KCMF1Q9P0J7 381 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 PHF11Q9UIL8 331 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms