RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 C1GALT1Q9NS00 363 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 K7EQS6 105 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 CAPN5O15484 640 aaPredicted RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 OR1F1O43749 312 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 SERPINB1P30740 379 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 RRM2P31350 389 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 RPS6KA3P51812 740 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 KRT33BQ14525 404 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 IQCCQ4KMZ1 466 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 XAF1Q6GPH4 301 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 SPARTQ8N0X7 666 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 TTC29Q8NA56 475 aaPredicted RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 EPYCQ99645 322 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 GMPPBQ9Y5P6 360 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 DGKBQ9Y6T7 804 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 HEATR5BQ9P2D3 2071 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 A0A1W2PQU0 124 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 TMEM229AB2RXF0 380 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 PTGES3LE9PB15 166 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 H3BMQ9 156 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 DPM1O60762 260 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 JUNBP17275 347 aaPredicted RBP19.29■□□□□ 0.68
VSX1-202ENST00000376709 GSTM2P28161 218 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 BSGP35613 385 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 KIR2DL1P43626 348 aaPredicted RBP19.29■□□□□ 0.68
VSX1-202ENST00000376709 CDK6Q00534 326 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 CDK5R2Q13319 367 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 KEAP1Q14145 624 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 HEPACAMQ14CZ8 416 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 MLF2Q15773 248 aaPredicted RBP19.29■□□□□ 0.68
VSX1-202ENST00000376709 LAIR2Q6ISS4 152 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 ADGRF3Q8IZF5 1079 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 OR13F1Q8NGS4 319 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 COG8Q96MW5 612 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 QRFPRQ96P65 431 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 MYOCQ99972 504 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 NLNQ9BYT8 704 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 ICKQ9UPZ9 632 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 PCDHGB3Q9Y5G1 929 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 SNX5Q9Y5X3 404 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 ATE1O95260 518 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 TNFRSF4P43489 277 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 CLK3P49761 638 aaKnown RBP19.29■□□□□ 0.68
VSX1-202ENST00000376709 NUP107P57740 925 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 ZNF630Q2M218 657 aaPredicted RBP19.29■□□□□ 0.68
VSX1-202ENST00000376709 NUDT13Q86X67 352 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 GDF15Q99988 308 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 APOL4Q9BPW4 351 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 TIMM29Q9BSF4 260 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 C1QTNF2Q9BXJ5 285 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 SLC17A9Q9BYT1 436 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 PITHD1Q9GZP4 211 aaPredicted RBP19.29■□□□□ 0.68
VSX1-202ENST00000376709 XKR8Q9H6D3 395 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 TESMINQ9Y4I5 508 aa19.29■□□□□ 0.68
VSX1-202ENST00000376709 M0QX08 132 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 ADAMDEC1O15204 470 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 ANGPTL1O95841 491 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 DNTTP04053 509 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 SERPIND1P05546 499 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 HTR1AP08908 422 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 TNFRSF1BP20333 461 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 UQCRC2P22695 453 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 MAT2AP31153 395 aaKnown RBP19.28■□□□□ 0.68
VSX1-202ENST00000376709 RAB28P51157 221 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 IFI44LQ53G44 452 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 TAMM41Q96BW9 452 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 TM4SF18Q96CE8 201 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 MAGED4Q96JG8 741 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 CNDP2Q96KP4 475 aaKnown RBP19.28■□□□□ 0.68
VSX1-202ENST00000376709 RIPOR3Q96MK2 946 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 CAMK1GQ96NX5 476 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 DOK1Q99704 481 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 SLC6A17Q9H1V8 727 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 NDUFAF4Q9P032 175 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 WBP11Q9Y2W2 641 aaKnown RBP19.28■□□□□ 0.68
VSX1-202ENST00000376709 GPSM3Q9Y4H4 160 aa19.28■□□□□ 0.68
VSX1-202ENST00000376709 NDUFS4O43181 175 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 CEACAM5P06731 702 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 CCDC159P0C7I6 412 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 OR1E2P47887 323 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 MANFP55145 182 aaKnown RBP19.27■□□□□ 0.68
VSX1-202ENST00000376709 PIGFQ07326 219 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 KIAA1161Q6NSJ0 714 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 PLD3Q8IV08 490 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 GAB3Q8WWW8 586 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 RGMAQ96B86 450 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 NODALQ96S42 347 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 C1QTNF7Q9BXJ2 289 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 CCDC90BQ9GZT6 254 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 LHPPQ9H008 270 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 ABCG4Q9H172 646 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 CXorf36Q9H7Y0 433 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 NT5DC2Q9H857 520 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 ANGPT4Q9Y264 503 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 TICRRQ7Z2Z1 1910 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 PDZK1P1A8MUH7 402 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 PDPK1O15530 556 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 PLRG1O43660 514 aaKnown RBP19.27■□□□□ 0.68
VSX1-202ENST00000376709 XPNPEP2O43895 674 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 RNGTTO60942 597 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms