RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PAQR7Q86WK9 346 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 C17orf64Q86WR6 236 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 ZNF295-AS1Q8N0V1 137 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 SIRT6Q8N6T7 355 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 ABHD11Q8NFV4 315 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 SLC5A11Q8WWX8 675 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 NEIL2Q969S2 332 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PHF21BQ96EK2 531 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 C14orf79Q96F83 325 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PRAP1Q96NZ9 151 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 MESP1Q9BRJ9 268 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 TGIF2Q9GZN2 237 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 CNOT10Q9H9A5 744 aaKnown RBP11.47□□□□□ -0.57
LSM2-208ENST00000375661 MKKSQ9NPJ1 570 aaPredicted RBP11.47□□□□□ -0.57
LSM2-208ENST00000375661 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 DNAJC11Q9NVH1 559 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 SENP1Q9P0U3 644 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 TEKT2Q9UIF3 430 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PLLPQ9Y342 182 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 ADGRG4Q8IZF6 3080 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 LOC105369274A0A096LPK9 316 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 LOC102723532A0A0G2JNH3 316 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 A0A0J9YVX5 310 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 K7EPI3 171 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 CCNT2O60583 730 aaKnown RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 SLC19A2O60779 497 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 SMIM24O75264 130 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 HEXBP07686 556 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 SNRPB2P08579 225 aaKnown RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 ESRRAP11474 423 aaPredicted RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 ATP5F1P24539 256 aaPredicted RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 HRH2P25021 359 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 CSNK1G2P78368 415 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 ADORA2A-AS1P86434 159 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 TESK1Q15569 626 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 CCDC153Q494R4 210 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 ABHD17BQ5VST6 288 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 GARNL3Q5VVW2 1013 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 TMEM205Q6UW68 189 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 NXPE4Q6UWF7 544 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 Q6ZPB1 254 aaPredicted RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 LRRC70Q7Z2Q7 622 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 LAPTM4BQ86VI4 370 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 PRSS58Q8IYP2 241 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 OR4N4Q8N0Y3 316 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 DTWD1Q8N5C7 304 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 OR4K1Q8NGD4 311 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 TCP10LQ8TDR4 215 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 THAP3Q8WTV1 239 aaPredicted RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 ARL8AQ96BM9 186 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 MTFMTQ96DP5 389 aaKnown RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 C10orf90Q96M02 699 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 ZFYVE21Q9BQ24 234 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 TUBB6Q9BUF5 446 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 C1QTNF3Q9BXJ4 246 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 ZNF700Q9H0M5 742 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 VIPAS39Q9H9C1 493 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 SSU72Q9NP77 194 aaKnown RBP11.46□□□□□ -0.57
LSM2-208ENST00000375661 ZNF446Q9NWS9 450 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 GPRC5BQ9NZH0 403 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 TRPC4Q9UBN4 977 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 TMCO1Q9UM00 188 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 DYRK1BQ9Y463 629 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 ACTL7BQ9Y614 415 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 KCNE2Q9Y6J6 123 aa11.46□□□□□ -0.57
LSM2-208ENST00000375661 GTF3C1Q12789 2109 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 HAT1O14929 419 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 CLDN14O95500 239 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 EIF2S1P05198 315 aaKnown RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 CYC1P08574 325 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 RPS17P08708 135 aaKnown RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 GNAZP19086 355 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 TAC1P20366 129 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 CCR8P51685 355 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 PRKAA2P54646 552 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 MEF2AQ02078 507 aaPredicted RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 RELAQ04206 551 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 EEF1A2Q05639 463 aaKnown RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 MPP2Q14168 576 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 KRTCAP3Q53RY4 240 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 ZYG11AQ6WRX3 759 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 SLCO4C1Q6ZQN7 724 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 RPS27LQ71UM5 84 aaKnown RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 ADCK2Q7Z695 626 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 PLD3Q8IV08 490 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 TEX9Q8N6V9 391 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 SNX31Q8N9S9 440 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 IMMP1LQ96LU5 166 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 FAM111AQ96PZ2 611 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 OR2A5Q96R48 311 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 SH3GL2Q99962 352 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 SPOCK3Q9BQ16 436 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 CAPS2Q9BXY5 557 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 SPNS1Q9H2V7 528 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 PELI2Q9HAT8 420 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms