RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 C3orf30Q96M34 536 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 BIRC8Q96P09 236 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 GBP5Q96PP8 586 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 PRR25Q96S07 402 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 ZNF382Q96SR6 550 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 GPR21Q99679 349 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 PKP2Q99959 881 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 CLSTN3Q9BQT9 956 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 CENPKQ9BS16 269 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 EFHD1Q9BUP0 239 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 TRIM15Q9C019 465 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 P2RY12Q9H244 342 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 MUC13Q9H3R2 512 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 TUBB1Q9H4B7 451 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 MID1IP1Q9NPA3 183 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 SDR39U1Q9NRG7 319 aaPredicted RBP4.64□□□□□ -1.67
USP48-202ENST00000374730 AIG1Q9NVV5 245 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 PLK2Q9NYY3 685 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 ADA2Q9NZK5 511 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 CCDC167Q9P0B6 97 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 IL17CQ9P0M4 197 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 POLG2Q9UHN1 485 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 TRMT6Q9UJA5 497 aaKnown RBP4.64□□□□□ -1.67
USP48-202ENST00000374730 PCTPQ9UKL6 214 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 MAFFQ9ULX9 164 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 TMEM98Q9Y2Y6 226 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 ZNF711Q9Y462 761 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 PCDHGB3Q9Y5G1 929 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 OR51B4Q9Y5P0 310 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 DNAJC15Q9Y5T4 150 aa4.64□□□□□ -1.67
USP48-202ENST00000374730 PLXNA2O75051 1894 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 C15orf38-AP3S2A0A0A6YYH1 394 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 TRBV5-4A0A0C4DH59 114 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SMIM31A0A1B0GVY4 71 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ATP6AP2A0A1C7CYW4 349 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 DYTNA2CJ06 578 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 MBD3L4A6NDZ8 208 aaPredicted RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 MBD3L3A6NE82 208 aaPredicted RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 PRORSD1PA6NEY8 169 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 RHPN2P1A8MT19 583 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 CDC7O00311 574 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 NR5A2O00482 541 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 NME4O00746 187 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PRMT5O14744 637 aaPredicted RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 ANGPT2O15123 496 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SOCS5O75159 536 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 NIPSNAP2O75323 286 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 EEDO75530 441 aaKnown RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 ATP6AP2O75787 350 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PGLSO95336 258 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 STAMBPO95630 424 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PABPC4LP0CB38 370 aaKnown RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 SMIM18P0DKX4 95 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 UROSP10746 265 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 IRF1P10914 325 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 MYF5P13349 255 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ZNF26P17031 533 aaPredicted RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 TSPAN8P19075 237 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 CAPN3P20807 821 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 HMGCLP35914 325 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PIK3CBP42338 1070 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SLC7A2P52569 658 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 FOXA1P55317 472 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 RHOAP61586 193 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 FOLH1Q04609 750 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 RCAN2Q14206 197 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 GRB7Q14451 532 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 TSNQ15631 228 aaKnown RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 ETFDHQ16134 617 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 TAF12Q16514 161 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 LRRC36Q1X8D7 754 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 KIF19Q2TAC6 998 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 LIN52Q52LA3 116 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 RNASE12Q5GAN4 147 aaKnown RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 IL23RQ5VWK5 629 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 LCN8Q6JVE9 175 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 RETSATQ6NUM9 610 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PGBD2Q6P3X8 592 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 CERS6Q6ZMG9 384 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 GPRIN3Q6ZVF9 776 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ANKRD33Q7Z3H0 272 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ARPINQ7Z6K5 226 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ADAMTSL2Q86TH1 951 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SYVN1Q86TM6 617 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 GPSM1Q86YR5 675 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 GALNT13Q8IUC8 556 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PIANPQ8IYJ0 282 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 CPNE9Q8IYJ1 553 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SPARTQ8N0X7 666 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SLC39A11Q8N1S5 342 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SIRT6Q8N6T7 355 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 PACRGLQ8N7B6 248 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 RNF148Q8N7C7 305 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 OR2T34Q8NGX1 318 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 OR2T3Q8NH03 318 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 TRPC4APQ8TEL6 797 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ZFAND2BQ8WV99 257 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 NCSTNQ92542 709 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 WBP2Q969T9 261 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms