RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SKA2Q8WVK7 121 aaPredicted RBP11.22□□□□□ -0.61
HDAC8-204ENST00000373560 ASZ1Q8WWH4 475 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 SLC44A1Q8WWI5 657 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 SMPDL3AQ92484 453 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 PDLIM2Q96JY6 352 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 PRAP1Q96NZ9 151 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 TIMP4Q99727 224 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 C19orf43Q9BQ61 176 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 TBL1YQ9BQ87 522 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 PROK2Q9HC23 129 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 ERN1O75460 977 aaKnown RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 IL18BPO95998 194 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 ZNF16P17020 682 aaPredicted RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 THBS2P35442 1172 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 DUSP8Q13202 625 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 LCE2AQ5TA79 106 aaPredicted RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 PRAMEF20Q5VT98 475 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 TTC23LQ6PF05 361 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 SLC26A11Q86WA9 606 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 GPALPP1Q8IXQ4 340 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 GCNT2Q8N0V5 402 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 RAB42Q8N4Z0 105 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 ZNF321PQ8N8H1 164 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 TM4SF19Q96DZ7 209 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 ZC3HAV1LQ96H79 300 aaKnown RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 MAK16Q9BXY0 300 aaKnown RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 ANGPTL4Q9BY76 406 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 PRDM14Q9GZV8 571 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 SLCO5A1Q9H2Y9 848 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 CXorf56Q9H5V9 222 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 SACM1LQ9NTJ5 587 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 PSD3Q9NYI0 1048 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 AIPL1Q9NZN9 384 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 SLC2A6Q9UGQ3 507 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 NDRG3Q9UGV2 375 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 MYO6Q9UM54 1294 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 CAMK2AQ9UQM7 478 aa11.21□□□□□ -0.61
HDAC8-204ENST00000373560 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.21□□□□□ -0.61
HDAC8-204ENST00000373560 NINQ8N4C6 2090 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 NOTCH1P46531 2555 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 LCMT2O60294 686 aaKnown RBP11.2□□□□□ -0.62
HDAC8-204ENST00000373560 ANXA9O76027 345 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 PGRP06401 933 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 TPM2P07951 284 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
HDAC8-204ENST00000373560 SRD5A1P18405 259 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 IGFBP5P24593 272 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 RBL1P28749 1068 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 CDKN1AP38936 164 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 HK2P52789 917 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 OCRLQ01968 901 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 KCTD11Q693B1 232 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 VASNQ6EMK4 673 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 ZNF534Q76KX8 674 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 LRRC25Q8N386 305 aaPredicted RBP11.2□□□□□ -0.62
HDAC8-204ENST00000373560 OR9A1PQ8NGU1 263 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 MAGEC3Q8TD91 643 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 VMP1Q96GC9 406 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 PKP4Q99569 1192 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 CARD6Q9BX69 1037 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 MYOTQ9UBF9 498 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 SLC6A5Q9Y345 797 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 CLDN16Q9Y5I7 305 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 CMYA5Q8N3K9 4069 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 FREM1Q5H8C1 2179 aa11.2□□□□□ -0.62
HDAC8-204ENST00000373560 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 A0A087X0T9 212 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 A0A1B0GTH6 734 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 CD8B2A6NJW9 211 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 A8MXE2 369 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 KPNA5O15131 536 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 KIF5CO60282 957 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 CST8O60676 142 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 GOT2P00505 430 aaKnown RBP11.19□□□□□ -0.62
HDAC8-204ENST00000373560 IGHV4-39P01824 125 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 FAM228BP0C875 321 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 PNLIPRP1P54315 467 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 RELAQ04206 551 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 TMED2Q15363 201 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 TMEM249Q2WGJ8 235 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 DEFB134Q4QY38 66 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 VSIG1Q86XK7 387 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 RASGEF1CQ8N431 466 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 LIX1Q8N485 282 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 AFAP1L2Q8N4X5 818 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 PPM1NQ8N819 430 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 ZNF740Q8NDX6 193 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 OR13J1Q8NGT2 312 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 STYXQ8WUJ0 223 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 VAT1Q99536 393 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 SLC30A3Q99726 388 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 PACSIN1Q9BY11 444 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 SHARPINQ9H0F6 387 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 ESRP2Q9H6T0 727 aaKnown RBP11.19□□□□□ -0.62
HDAC8-204ENST00000373560 ARNT2Q9HBZ2 717 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 ACKR4Q9NPB9 350 aa11.19□□□□□ -0.62
HDAC8-204ENST00000373560 PNO1Q9NRX1 252 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms