RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 ITGAMP11215 1152 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 CYP4B1P13584 511 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 AGXTP21549 392 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 MAT2AP31153 395 aaKnown RBP12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 TTKP33981 857 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 SOAT1P35610 550 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 SCARB2Q14108 478 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 SIM2Q14190 667 aaPredicted RBP12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 BROXQ5VW32 411 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 PLD3Q8IV08 490 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 ZC3H7AQ8IWR0 971 aaKnown RBP12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 SPPL2AQ8TCT8 520 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 TM4SF18Q96CE8 201 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 NRBF2Q96F24 287 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 BTBD1Q9H0C5 482 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 FZD3Q9NPG1 666 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 AP1M2Q9Y6Q5 423 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 DGKBQ9Y6T7 804 aa12.15□□□□□ -0.47
TSC22D3-206ENST00000372397 CAPN5O15484 640 aaPredicted RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 PLRG1O43660 514 aaKnown RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 LCMT2O60294 686 aaKnown RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 TNFRSF1BP20333 461 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 NTSR1P30989 418 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 IGFALSP35858 605 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 IL18R1Q13478 541 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 RAPSNQ13702 412 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 KRT33BQ14525 404 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 CLCA4Q14CN2 919 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 SKIV2LQ15477 1246 aaKnown RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 TMEM196Q5HYL7 178 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 GPR107Q5VW38 600 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 Q6ZNX1 250 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 RAB42Q8N4Z0 105 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 ABTB1Q969K4 478 aaPredicted RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 C12orf43Q96C57 262 aaKnown RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 MYOCQ99972 504 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 ABCG4Q9H172 646 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 RUBCNLQ9H714 662 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 NT5DC2Q9H857 520 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 FANCEQ9HB96 536 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 THUMPD1Q9NXG2 353 aaKnown RBP12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 GPSM3Q9Y4H4 160 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 SNX8Q9Y5X2 465 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 MYO10Q9HD67 2058 aa12.14□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3DA0A087WVF3 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3IA0A087WXS9 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3EA0A087X179 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3KA0A087X1G2 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3FA6NER0 549 aaPredicted RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3LB9A6J9 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 M0QX08 132 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 SCAMP1O15126 338 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 ABCB7O75027 752 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 UGT2B11O75310 529 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 KRT75O95678 551 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 C9P02748 559 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 DNTTP04053 509 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3HP0C7X1 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 DDCP20711 480 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 RYKP34925 604 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 CLK3P49761 638 aaKnown RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 CSNK1G2P78368 415 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 IL5RAQ01344 420 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 EEF1A2Q05639 463 aaKnown RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 PIGFQ07326 219 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 RBBP4Q09028 425 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 FADDQ13158 208 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3GQ6DHY5 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3CQ6IPX1 549 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 KIAA1161Q6NSJ0 714 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 PAGE2Q7Z2X7 111 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 ADCK2Q7Z695 626 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TSEN54Q7Z6J9 526 aaKnown RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 FAM20CQ8IXL6 584 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TBC1D3Q8IZP1 549 aaPredicted RBP12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 ATG16L2Q8NAA4 619 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 SMYD1Q8NB12 490 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 RGMAQ96B86 450 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TIMM29Q9BSF4 260 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 APOOQ9BUR5 198 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 S1PR5Q9H228 398 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 TMEM38AQ9H6F2 299 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 CXorf36Q9H7Y0 433 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 ICKQ9UPZ9 632 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 SLC17A4Q9Y2C5 497 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 PADI2Q9Y2J8 665 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 IGKV1-8A0A0C4DH67 115 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 PRAMEF33A0A0G2JMD5 474 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 OR52A4PA6NMU1 304 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 SLC31A1O15431 190 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 NDUFS4O43181 175 aa12.13□□□□□ -0.47
TSC22D3-206ENST00000372397 CBFA2T3O75081 653 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms