RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 CEACAM4O75871 244 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 MLYCDO95822 493 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CLDN1O95832 211 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 IGHEP01854 428 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 UMODP07911 640 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CPA3P15088 417 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 HNRNPH1P31943 449 aaKnown RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 PIK3CBP42338 1070 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CDH13P55290 713 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 NAA20P61599 178 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 MAT1AQ00266 395 aaKnown RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CLCQ05315 142 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 DDX39BQ13838 428 aaKnown RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 SYT16Q17RD7 645 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 ADPRMQ3LIE5 342 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 TMEM35AQ53FP2 167 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 UNC50Q53HI1 259 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 C10orf62Q5T681 223 aaPredicted RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 MYO7BQ6PIF6 2116 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 SHISA6Q6ZSJ9 500 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 MILR1Q7Z6M3 343 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 ZC3H7AQ8IWR0 971 aaKnown RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 OR2L5Q8NG80 312 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 OR4F6Q8NGB9 312 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 TRPC4APQ8TEL6 797 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 ZNF473Q8WTR7 871 aaKnown RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 NACC2Q96BF6 587 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 MS4A6EQ96DS6 147 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CMTM7Q96FZ5 175 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CDK15Q96Q40 435 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 MS4A8Q9BY19 250 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 TGIF2Q9GZN2 237 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 KLHL31Q9H511 634 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 COPS7BQ9H9Q2 264 aaPredicted RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 CLK4Q9HAZ1 481 aaKnown RBP13.47□□□□□ -0.25
UBL4A-201ENST00000369653 SEMA3GQ9NS98 782 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 TRPS1Q9UHF7 1281 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 PLLPQ9Y342 182 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 RNF11Q9Y3C5 154 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 ZNF451Q9Y4E5 1061 aa13.47□□□□□ -0.25
UBL4A-201ENST00000369653 PCNX1Q96RV3 2341 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 GOLGA6L10A6NI86 522 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 C4orf51C9J302 202 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 PEX12O00623 359 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 SPAG7O75391 227 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 SMIM10L1P0DMW3 83 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 TSPAN8P19075 237 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 IL10P22301 178 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 MMP11P24347 488 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 XCR1P46094 333 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 DNAJB13P59910 316 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 BTN3A2P78410 334 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 KLC1Q07866 573 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 ASPHQ12797 758 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 LCP2Q13094 533 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 IFT88Q13099 833 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 NR6A1Q15406 480 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 ZRSR2Q15696 482 aaKnown RBP13.46□□□□□ -0.25
UBL4A-201ENST00000369653 VWA2Q5GFL6 755 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 CFAP157Q5JU67 520 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 LIPMQ5VYY2 423 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 TTC19Q6DKK2 380 aaPredicted RBP13.46□□□□□ -0.25
UBL4A-201ENST00000369653 CHSY3Q70JA7 882 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 RPS27LQ71UM5 84 aaKnown RBP13.46□□□□□ -0.25
UBL4A-201ENST00000369653 MRGPREQ86SM8 312 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 PRSS58Q8IYP2 241 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 CCNYL1Q8N7R7 359 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.25
UBL4A-201ENST00000369653 ARMC2Q8NEN0 867 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 OR51Q1Q8NH59 317 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 HUS1BQ8NHY5 278 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 PGM2Q96G03 612 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 SMIM10Q96HG1 83 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 VPS50Q96JG6 964 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 KCNC2Q96PR1 638 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 ZNF382Q96SR6 550 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 ROGDIQ9GZN7 287 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 C12orf65Q9H3J6 166 aaKnown RBP13.46□□□□□ -0.25
UBL4A-201ENST00000369653 SLAMF7Q9NQ25 335 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 DMRT3Q9NQL9 472 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 ERRFI1Q9UJM3 462 aaPredicted RBP13.46□□□□□ -0.25
UBL4A-201ENST00000369653 C3orf18Q9UK00 162 aa13.46□□□□□ -0.25
UBL4A-201ENST00000369653 PSMD12O00232 456 aaPredicted RBP13.45□□□□□ -0.26
UBL4A-201ENST00000369653 PCDH17O14917 1159 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
UBL4A-201ENST00000369653 B3GALT4O96024 378 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 HEXBP07686 556 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 CYC1P08574 325 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 JAK1P23458 1154 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 RAP1GDS1P52306 607 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 PLA2G16P53816 162 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 PKNOX1P55347 436 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 PCLAFQ15004 111 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 MINDY4Q4G0A6 757 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 MFSD4BQ5TF39 518 aa13.45□□□□□ -0.26
UBL4A-201ENST00000369653 KHDRBS2Q5VWX1 349 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms