RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 RAI2Q9Y5P3 530 aa15.53■□□□□ 0.08
CHD1L-203ENST00000369259 SMIM30A4D0T7 59 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 QSOX1O00391 747 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 NDUFA2O43678 99 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 PRAMEF11O60813 436 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 GCM2O75603 506 aaPredicted RBP15.52■□□□□ 0.08
CHD1L-203ENST00000369259 HMBSP08397 361 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 HK1P19367 917 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 CLCNKAP51800 687 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 BTG1P62324 171 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 SRSF11Q05519 484 aaKnown RBP15.52■□□□□ 0.08
CHD1L-203ENST00000369259 FRMPD2BQ6IN97 320 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 TMEM81Q6P7N7 255 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 ZBTB44Q8NCP5 570 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 UBTD2Q8WUN7 234 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 TMEM203Q969S6 136 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 CMTM7Q96FZ5 175 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 FAM193BQ96PV7 902 aaPredicted RBP15.52■□□□□ 0.08
CHD1L-203ENST00000369259 MED28Q9H204 178 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 CHST8Q9H2A9 424 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 NMUR1Q9HB89 426 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 BPIFA1Q9NP55 256 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 CUEDC1Q9NWM3 386 aaPredicted RBP15.52■□□□□ 0.08
CHD1L-203ENST00000369259 SNX11Q9Y5W9 270 aa15.52■□□□□ 0.08
CHD1L-203ENST00000369259 ISM1B1AKI9 464 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 SGK494L7N484 410 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 ALDH1A1P00352 501 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 PRPS1L1P21108 318 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 POU1F1P28069 291 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 PCGF2P35227 344 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 OR1E2P47887 323 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 CCT3P49368 545 aaKnown RBP15.51■□□□□ 0.07
CHD1L-203ENST00000369259 EXOSC2Q13868 293 aaKnown RBP15.51■□□□□ 0.07
CHD1L-203ENST00000369259 IL18Q14116 193 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 STK11Q15831 433 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 IFI44LQ53G44 452 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 CLECL1Q8IZS7 167 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 OR8K5Q8NH50 307 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHD1L-203ENST00000369259 TMEM40Q8WWA1 233 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 IGSF8Q969P0 613 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 APIPQ96GX9 242 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 DPCDQ9BVM2 203 aaPredicted RBP15.51■□□□□ 0.07
CHD1L-203ENST00000369259 NT5DC2Q9H857 520 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 SCML1Q9UN30 329 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 A0A0A6YYJ9 748 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 NBNO60934 754 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 OPN1SWP03999 348 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 PTBP1P26599 531 aaKnown RBP eCLIP15.51■□□□□ 0.073e-8■■■□□ 15.9
CHD1L-203ENST00000369259 STK19P49842 368 aaPredicted RBP15.51■□□□□ 0.07
CHD1L-203ENST00000369259 SNRPGP62308 76 aaKnown RBP15.51■□□□□ 0.07
CHD1L-203ENST00000369259 FGFBP1Q14512 234 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 UGT8Q16880 541 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 RNLSQ5VYX0 342 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 ALG1LQ6GMV1 187 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 TMEM107Q6UX40 140 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 GPR65Q8IYL9 337 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 STK40Q8N2I9 435 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 TMEM163Q8TC26 289 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 UCN3Q969E3 161 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 APOLD1Q96LR9 279 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 ZSWIM3Q96MP5 696 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 RERGLQ9H628 205 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 EMC7Q9NPA0 242 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 PTTG3PQ9NZH4 202 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 SRRDQ9UH36 339 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 UBQLN2Q9UHD9 624 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 FKBP7Q9Y680 259 aa15.51■□□□□ 0.07
CHD1L-203ENST00000369259 IGLV3-10A0A075B6K4 115 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 A0A1W2PQH9 124 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 ZNF623O75123 536 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 PPM1BO75688 479 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 NAT2P11245 290 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 PRPH2P23942 346 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 RGS4P49798 205 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 AGFG1P52594 562 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 RPA4Q13156 261 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 TEAD4Q15561 434 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 PUS10Q3MIT2 529 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 FBXL22Q6P050 247 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 METTL2BQ6P1Q9 378 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 PAQR6Q6TCH4 344 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 C3orf58Q8NDZ4 430 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 PCNPQ8WW12 178 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 RBPMSQ93062 196 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 COPS8Q99627 209 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 CLEC4MQ9H2X3 399 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 ELOVL6Q9H5J4 265 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 FAM120CQ9NX05 1096 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 DNAJC27Q9NZQ0 273 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 A0A1B0GVM2 712 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 TLR4O00206 839 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 HPGDSO60760 199 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 STK16O75716 305 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 CPEP16870 476 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 GBX2P52951 348 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 TBX4P57082 545 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 RAB14P61106 215 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 B2MP61769 119 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 TAPT1Q6NXT6 567 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms