RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 HPDP32754 393 aaPredicted RBP17.77■□□□□ 0.44
CKS1B-203ENST00000368439 TNFSF10P50591 281 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 RAB38P57729 211 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 ARG2P78540 354 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 METTL2BQ6P1Q9 378 aaKnown RBP17.77■□□□□ 0.44
CKS1B-203ENST00000368439 ZNF793Q6ZN11 406 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 GOLGA7Q7Z5G4 137 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 GSPT2Q8IYD1 628 aaKnown RBP17.77■□□□□ 0.44
CKS1B-203ENST00000368439 NFAM1Q8NET5 270 aaPredicted RBP17.77■□□□□ 0.44
CKS1B-203ENST00000368439 ELP5Q8TE02 316 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 UBE2E3Q969T4 207 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 KCMF1Q9P0J7 381 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 XPR1Q9UBH6 696 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 DAPP1Q9UN19 280 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 MMACHCQ9Y4U1 282 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 DOPEY2Q9Y3R5 2298 aa17.77■□□□□ 0.43
CKS1B-203ENST00000368439 LRRK2Q5S007 2527 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 PTPN13Q12923 2485 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 CYR61O00622 381 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 B3GALT2O43825 422 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 SNRPAP09012 282 aaKnown RBP17.76■□□□□ 0.43
CKS1B-203ENST00000368439 MTTPP55157 894 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 LIM2P55344 173 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 ACTN3Q08043 901 aaPredicted RBP17.76■□□□□ 0.43
CKS1B-203ENST00000368439 GTF2H2Q13888 395 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 TSNAXIP1Q2TAA8 658 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 LIPJQ5W064 366 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 RPUSD3Q6P087 351 aaKnown RBP17.76■□□□□ 0.43
CKS1B-203ENST00000368439 GTF2H2CQ6P1K8 395 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 TIFABQ6ZNK6 161 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 RNF175Q8N4F7 328 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 PTGR2Q8N8N7 351 aaPredicted RBP17.76■□□□□ 0.43
CKS1B-203ENST00000368439 CSF3RQ99062 836 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 STMN3Q9NZ72 180 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 TNPO3Q9Y5L0 923 aaKnown RBP17.76■□□□□ 0.43
CKS1B-203ENST00000368439 COPG1Q9Y678 874 aaKnown RBP17.76■□□□□ 0.43
CKS1B-203ENST00000368439 HIVEP3Q5T1R4 2406 aa17.76■□□□□ 0.43
CKS1B-203ENST00000368439 A0A088AWK7 358 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 DYTNA2CJ06 578 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 SAGE2PA6NJ88 616 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 A8MUI8 341 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 OR7A17O14581 309 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 MAN1A2O60476 641 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 UGDHO60701 494 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 SCELO95171 688 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 CBX6O95503 412 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 F10P00742 488 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 TGFB1P01137 390 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 PCNAP12004 261 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF10P21506 573 aaPredicted RBP17.75■□□□□ 0.43
CKS1B-203ENST00000368439 SERPINB1P30740 379 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 HSD17B7P56937 341 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF33BQ06732 778 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 MRPL49Q13405 166 aaKnown RBP17.75■□□□□ 0.43
CKS1B-203ENST00000368439 UBAP2LQ14157 1087 aaKnown RBP17.75■□□□□ 0.43
CKS1B-203ENST00000368439 SLC29A2Q14542 456 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 ACER2Q5QJU3 275 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 DEPDC1Q5TB30 811 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 FCRLBQ6BAA4 426 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 CRLF3Q8IUI8 442 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 EIF1ADQ8N9N8 165 aaKnown RBP17.75■□□□□ 0.43
CKS1B-203ENST00000368439 L3MBTL4Q8NA19 623 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 OR1N1Q8NGS0 311 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 HUS1BQ8NHY5 278 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 ADAMTS18Q8TE60 1221 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 CMTM7Q96FZ5 175 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 KCNC2Q96PR1 638 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 TBCDQ9BTW9 1192 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 IPPKQ9H8X2 491 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 KCNK13Q9HB14 408 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 ZBTB26Q9HCK0 441 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 MAP10Q9P2G4 905 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 ANGPTL3Q9Y5C1 460 aa17.75■□□□□ 0.43
CKS1B-203ENST00000368439 H0YIV9 168 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 STX16-NPEPL1H3BU86 382 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 RTCAO00442 366 aaKnown RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 STX16O14662 325 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 SH3BGRLO75368 114 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ATP5A1P25705 553 aaKnown RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 EEF1DP29692 281 aaKnown RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 PIK3CBP42338 1070 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 TGM3Q08188 693 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 NR6A1Q15406 480 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 TMEM35AQ53FP2 167 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ABHD17BQ5VST6 288 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 KHDRBS2Q5VWX1 349 aaKnown RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF595Q8IYB9 648 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 KIF2BQ8N4N8 673 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ACOT4Q8N9L9 421 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 FAM47BQ8NA70 645 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 SRFBP1Q8NEF9 429 aaKnown RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 WDR20Q8TBZ3 569 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 MZB1Q8WU39 189 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 PHF21BQ96EK2 531 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 SCYL1Q96KG9 808 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF354BQ96LW1 612 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 MAGEB10Q96LZ2 347 aaPredicted RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 MRPL57Q9BQC6 102 aaKnown RBP17.74■□□□□ 0.43
CKS1B-203ENST00000368439 SLC29A3Q9BZD2 475 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ROGDIQ9GZN7 287 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms