RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 HSMCR30P0CW71 290 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 TDGF1P13385 188 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 FUT1P19526 365 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 NCF2P19878 526 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 ACP1P24666 158 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 RORAP35398 523 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 ATP5C1P36542 298 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 LIPAP38571 399 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 MAGEA9P43362 315 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 KCNJ1P48048 391 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 RFX5P48382 616 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC1A6P48664 564 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 FHITP49789 147 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC26A2P50443 739 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 RAB28P51157 221 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 MTTPP55157 894 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CDH6P55285 790 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 UCP2P55851 309 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SKP1P63208 163 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 TROAPQ12815 778 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CDC20Q12834 499 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 TMEM115Q12893 351 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 DGCR6Q14129 220 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 GPR176Q14439 515 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PTPRRQ15256 657 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SF3A2Q15428 464 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 USF2Q15853 346 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SYT16Q17RD7 645 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC36A3Q495N2 470 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 AASDHQ4L235 1098 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 HIKESHIQ53FT3 197 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 LCN1P1Q5VSP4 162 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 LIPMQ5VYY2 423 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 ZDHHC20Q5W0Z9 365 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CARD17Q5XLA6 110 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 FAM90A2PQ658T7 463 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 GRHL2Q6ISB3 625 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SARM1Q6SZW1 724 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC24A5Q71RS6 500 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 NELFCDQ8IXH7 590 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 C10orf67Q8IYJ2 551 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PM20D2Q8IYS1 436 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 KATNAL2Q8IYT4 538 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 DSELQ8IZU8 1212 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 ZNF843Q8N446 348 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 MINDY1Q8N5J2 469 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 TBC1D19Q8N5T2 526 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 C11orf65Q8NCR3 313 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 OR5T1Q8NG75 326 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 BBS10Q8TAM1 723 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 UBA3Q8TBC4 463 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC20A1Q8WUM9 679 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SELENOMQ8WWX9 145 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PSPC1Q8WXF1 523 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 FKBP10Q96AY3 582 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CTHRC1Q96CG8 243 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 R3HDM4Q96D70 268 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CDRT15Q96T59 188 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 GAD1Q99259 594 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 ADGRE3Q9BY15 652 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PARD6BQ9BYG5 372 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 OR51V1Q9H2C8 321 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CUEDC2Q9H467 287 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 AKIRIN1Q9H9L7 192 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 GLOD4Q9HC38 313 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 NEK6Q9HC98 313 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SEMA4BQ9NPR2 832 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PPANQ9NQ55 473 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 TRIM36Q9NQ86 728 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 C12orf4Q9NQ89 552 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PANK4Q9NVE7 773 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 KCND2Q9NZV8 630 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 KLHL8Q9P2G9 620 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PSMC3IPQ9P2W1 217 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CRNNQ9UBG3 495 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 MGAT4CQ9UBM8 478 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 IL20RAQ9UHF4 553 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 DCDC2Q9UHG0 476 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 SLC24A2Q9UI40 661 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 DBNLQ9UJU6 430 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PADI1Q9ULC6 663 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 RNF24Q9Y225 148 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 NFE2L3Q9Y4A8 694 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 PCDHB7Q9Y5E2 793 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 MAU2Q9Y6X3 613 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 CCDC171Q6TFL3 1326 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 FNDC1Q4ZHG4 1894 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 MYH8P13535 1937 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 LOXHD1Q8IVV2 1947 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 ITPR3Q14573 2671 aa4.85□□□□□ -1.63
ECHDC1-204ENST00000368292 FBN2P35556 2912 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 APC2O95996 2303 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 DOPEY2Q9Y3R5 2298 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 LOC105369274A0A096LPK9 316 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 LOC102723532A0A0G2JNH3 316 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 OR6C70A6NIJ9 312 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 EFCAB8A8MWE9 144 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 KDM4EB2RXH2 506 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 KCNJ18B7U540 433 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 545.3 ms