RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZZZ3Q8IYH5 903 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 DEPDC4Q8N2C3 294 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 CBARPQ8N350 705 aaPredicted RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 HDDC3Q8N4P3 179 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 LPCAT1Q8NF37 534 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 OR2I1PQ8NGU4 316 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 SETD6Q8TBK2 473 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 DNASE2BQ8WZ79 361 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 PROX1Q92786 737 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 ESAMQ96AP7 390 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 PLD4Q96BZ4 506 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 HSPA12BQ96MM6 686 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 GTPBP2Q9BX10 602 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 CLPBQ9H078 707 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 SLC6A17Q9H1V8 727 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 AASDHPPTQ9NRN7 309 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 KRT84Q9NSB2 600 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 FAM120CQ9NX05 1096 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 KLQ9UEF7 1012 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 ENOPH1Q9UHY7 261 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 UTS2RQ9UKP6 389 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 KLK13Q9UKR3 277 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 SNX6Q9UNH7 406 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 TRAPPC4Q9Y296 219 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 PCDHGA3Q9Y5H0 932 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 KLK4Q9Y5K2 254 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 ACACAQ13085 2346 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 A0A075B6Q4 140 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 FAM172BPA6NC97 362 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 TOR1BO14657 336 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 SNPHO15079 494 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 AIREO43918 545 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 OR1I1O60431 355 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 WBP4O75554 376 aaKnown RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 FADS2O95864 444 aaKnown RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 CDK1P06493 297 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 SYPP08247 313 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 CTPS1P17812 591 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ITGALP20701 1170 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 PRPS1L1P21108 318 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 FUT4P22083 530 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 PRKACGP22612 351 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 NR4A1P22736 598 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 KDELR2P33947 212 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 KRT20P35900 424 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 GGT2P36268 569 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ARL1P40616 181 aaPredicted RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 RGRP47804 291 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 HSPA7P48741 367 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ALDH9A1P49189 494 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 SLC11A2P49281 568 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 CDKN1CP49918 316 aaPredicted RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 AP1S1P61966 158 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 NPRL3Q12980 569 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 SLC14A1Q13336 389 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 GPR33Q49SQ1 333 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 GTDC1Q4AE62 458 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 CATSPEREQ5SY80 951 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 TMEM236Q5W0B7 351 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ANKRD34AQ69YU3 496 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 P3H2Q8IVL5 708 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ZBTB2Q8N680 514 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 DENND6BQ8NEG7 585 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 OR7D4Q8NG98 312 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ULK4Q96C45 1275 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ERLEC1Q96DZ1 483 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 COL21A1Q96P44 957 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 ELOVL2Q9NXB9 296 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 WSB2Q9NYS7 404 aaPredicted RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 SPATA7Q9P0W8 599 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 THAP10Q9P2Z0 257 aaPredicted RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 PSORS1C1Q9UIG5 152 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 RNF6Q9Y252 685 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 SAMHD1Q9Y3Z3 626 aaKnown RBP11.06□□□□□ -0.64
USF1-201ENST00000368019 PCDHGB3Q9Y5G1 929 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 STON1Q9Y6Q2 735 aa11.06□□□□□ -0.64
USF1-201ENST00000368019 KCNE1BA0A087WTH5 132 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 A0A1B0GVM2 712 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 NPC1O15118 1278 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 SLC16A5O15375 505 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 UGDHO60701 494 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 MITFO75030 526 aaPredicted RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 STK16O75716 305 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 LATS1O95835 1130 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 IGLV3-19P01714 112 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 APOA1P02647 267 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 RHOCP08134 193 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 ANXA5P08758 320 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 ANXA8P13928 327 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 POLR2EP19388 210 aaKnown RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 CASP3P42574 277 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 CD300CQ08708 224 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 SP140Q13342 867 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 CAMK2GQ13555 558 aaPredicted RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 DNASE1L3Q13609 305 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 GTF2H3Q13889 308 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms