RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CSTF3Q12996 717 aaKnown RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 LAPTM5Q13571 262 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 DOC2AQ14183 400 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 INPP5JQ15735 1006 aaPredicted RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 IMPG1Q17R60 797 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PRR30Q53SZ7 412 aaPredicted RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 COQ5Q5HYK3 327 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PAGE2BQ5JRK9 111 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 WASHC2DQ5SRD0 308 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 ATG9BQ674R7 924 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 TMEM71Q6P5X7 295 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 ABRAXAS1Q6UWZ7 409 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 HACD2Q6Y1H2 254 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 GK5Q6ZS86 529 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 FUNDC1Q8IVP5 155 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 APLFQ8IW19 511 aaPredicted RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 NAGSQ8N159 534 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 ESX1Q8N693 406 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PPFIBP2Q8ND30 876 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 FAM13CQ8NE31 585 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 WDR20Q8TBZ3 569 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 RCN3Q96D15 328 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 REPS1Q96D71 796 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 CMTM7Q96FZ5 175 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 C12orf66Q96MD2 445 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 FERD3LQ96RJ6 166 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 MENTQ9BUN1 341 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 EFCAB11Q9BUY7 163 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 RAB11FIP5Q9BXF6 653 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 OSGEPL1Q9H4B0 414 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 LRTM1Q9HBL6 345 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 FARSBQ9NSD9 589 aaKnown RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 C1orf109Q9NX04 203 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 TRNAU1APQ9NX07 287 aaKnown RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PDP2Q9P2J9 529 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PRPF19Q9UMS4 504 aaKnown RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 EIF3LQ9Y262 564 aaKnown RBP10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC5A6Q9Y289 635 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 NDUFAF1Q9Y375 327 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PLEKHM1Q9Y4G2 1056 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 PCDHGA11Q9Y5H2 935 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 MYO7BQ6PIF6 2116 aa10.72□□□□□ -0.69
CSNK1E-202ENST00000366216 DYTNA2CJ06 578 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 HNRNPRO43390 633 aaKnown RBP10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 KDM1AO60341 852 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC22A3O75751 556 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 NUDT7P0C024 238 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 C1GALT1C1LP0DN25 315 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC2A4P14672 509 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 NUDT2P50583 147 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 HMGCS1Q01581 520 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 ART3Q13508 389 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 KIAA0040Q15053 153 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 RPE65Q16518 533 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 RFTN2Q52LD8 501 aaPredicted RBP10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 SGO1Q5FBB7 561 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 PRAMEF13Q5VWM6 474 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 REP15Q6BDI9 236 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 PGM2L1Q6PCE3 622 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 NXPE4Q6UWF7 544 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 ZNF761Q86XN6 746 aaPredicted RBP10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 SCUBE1Q8IWY4 988 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 FAM9CQ8IZT9 166 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 DSELQ8IZU8 1212 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 PGAM4Q8N0Y7 254 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 OR9I1Q8NGQ6 314 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC5A11Q8WWX8 675 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 SMPDL3AQ92484 453 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 NEIL2Q969S2 332 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 FCRL1Q96LA6 429 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 HBEGFQ99075 208 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 GSDMCQ9BYG8 508 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 ACPTQ9BZG2 426 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 BRF2Q9HAW0 419 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 TAAR2Q9P1P5 351 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 MAP10Q9P2G4 905 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 CIDEBQ9UHD4 219 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 CROTQ9UKG9 612 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 TDRKHQ9Y2W6 561 aaKnown RBP10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 TMED5Q9Y3A6 229 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 TSC22D4Q9Y3Q8 395 aa10.71□□□□□ -0.69
CSNK1E-202ENST00000366216 FBN3Q75N90 2809 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 A0A088AWK7 358 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 ARHGAP10A1A4S6 786 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 FAM234BA2RU67 622 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 CDC14CA4D256 554 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 A8MU76 341 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 PDZK1P1A8MUH7 402 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 FBP2O00757 339 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 ANKRD28O15084 1053 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 POLR1CO15160 346 aaPredicted RBP10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 MTHFD1P11586 935 aaKnown RBP10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 PRPS2P11908 318 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 ZNF28P17035 718 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 JAK1P23458 1154 aa10.7□□□□□ -0.7
CSNK1E-202ENST00000366216 NDUFS1P28331 727 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms