RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RNF112Q9ULX5 631 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 A0A0G2JN53 185 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ESYT3A0FGR9 886 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ANKDD1BA6NHY2 528 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PSMD12O00232 456 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SP1P08047 785 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LTA4HP09960 611 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TFEBP19484 476 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TPP2P29144 1249 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CRABP2P29373 138 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RAB38P57729 211 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SLC7A5Q01650 507 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 EFTUD2Q15029 972 aaKnown RBP eCLIP12.78□□□□□ -0.364e-7■■■■■ 50.6
TNFRSF1A-202ENST00000366159 XKR6Q5GH73 641 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GFRALQ6UXV0 394 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LRRC70Q7Z2Q7 622 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CENPLQ8N0S6 344 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZNF473Q8WTR7 871 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 FAR2Q96K12 515 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NMRAL1Q9HBL8 299 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 DAPP1Q9UN19 280 aa12.78□□□□□ -0.36
TNFRSF1A-202ENST00000366159 DIDO1Q9BTC0 2240 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CCDC189A1A4V9 331 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CCNT2O60583 730 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZG16O60844 167 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 KERAO60938 352 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 UNC5CO95185 931 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 DCTP40126 519 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PLA2G16P53816 162 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 LIM2P55344 173 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PER3P56645 1201 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TAS2R50P59544 299 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CHIT1Q13231 466 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 LAPTM5Q13571 262 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 UBAP2Q5T6F2 1119 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 C1QL3Q5VWW1 255 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF787Q6DD87 383 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SLC25A25Q6KCM7 469 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RELL1Q8IUW5 271 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SIAH3Q8IW03 269 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF595Q8IYB9 648 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 LAS2Q8IYD9 372 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CYP4X1Q8N118 509 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ARMC2Q8NEN0 867 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RHEBL1Q8TAI7 183 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ADAMTS18Q8TE60 1221 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 THAP3Q8WTV1 239 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NXNL1Q96CM4 212 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 FRMD6Q96NE9 622 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 GPR78Q96P69 363 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 F2RL3Q96RI0 385 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CSF3RQ99062 836 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 FUT8Q9BYC5 575 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 LRFN1Q9P244 771 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SEC14L3Q9UDX4 400 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF835Q9Y2P0 537 aa12.77□□□□□ -0.37
TNFRSF1A-202ENST00000366159 A0A088AWK7 358 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TMEM200CA6NKL6 621 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 A8MUA0 341 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 K7EPI3 171 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 UBXN8O00124 270 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 B3GALT2O43825 422 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 KLK8O60259 260 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NME2P1O60361 137 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SCELO95171 688 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 C2P06681 752 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CD46P15529 392 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF10P21506 573 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NME2P22392 152 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 EEF1DP29692 281 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PPP2R1BP30154 601 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MTTPP55157 894 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 IRF8Q02556 426 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PAGE2BQ5JRK9 111 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF793Q6ZN11 406 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RAPH1Q70E73 1250 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CCDC91Q7Z6B0 441 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TBC1D1Q86TI0 1168 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 FJX1Q86VR8 437 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CHERPQ8IWX8 916 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 HORMAD2Q8N7B1 307 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TMEM178AQ8NBL3 297 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CCT6BQ92526 530 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MS4A8Q9BY19 250 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 KLHL1Q9NR64 748 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PRTFDC1Q9NRG1 225 aa12.76□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RYDENQ9NUL5 291 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms