RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 RPS27AP62979 156 aaKnown RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 FOLH1Q04609 750 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 CYLC2Q14093 348 aaPredicted RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 C3AR1Q16581 482 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 SHQ1Q6PI26 577 aaKnown RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 SPATA19Q7Z5L4 167 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 SLC43A2Q8N370 569 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 ITLN1Q8WWA0 313 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 BPIFA2Q96DR5 249 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 SGF29Q96ES7 293 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 ALKBH3Q96Q83 286 aaPredicted RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 SERINC2Q96SA4 455 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 PRMT1Q99873 361 aaKnown RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 BAG1Q99933 345 aaPredicted RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 CFDP1Q9UEE9 299 aaPredicted RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 HTR3EA5X5Y0 456 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 IGLON5A6NGN9 336 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 DKC1O60832 514 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZFYP08048 801 aaPredicted RBP3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 QDPRP09417 244 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 TIA1P31483 386 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 SLC1A3P43003 542 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 SLC1A4P43007 532 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 PPA1Q15181 289 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 ECSCRQ19T08 205 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZRANB3Q5FWF4 1079 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 TEX35Q5T0J7 233 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 NEPROQ6NW34 567 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 CAVIN1Q6NZI2 390 aaKnown RBP3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 RFPL4BQ6ZWI9 263 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 HIPK1Q86Z02 1210 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 GPD1LQ8N335 351 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 BANPQ8N9N5 519 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 LIPHQ8WWY8 451 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 LIME1Q9H400 295 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 PDRG1Q9NUG6 133 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZNF581Q9P0T4 197 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 GIMAP2Q9UG22 337 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 NIP7Q9Y221 180 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 VSIG4Q9Y279 399 aa3.43□□□□□ -1.86
RNU4-28P-201ENST00000364739 TEX48A0A1B0GUV7 120 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 A0A1W2PQ72 361 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 ANKDD1BA6NHY2 528 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 KLLNB2CW77 178 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 E9PAM4 449 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 H7C0S8 307 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 THY1P04216 161 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 FAM200BP0CF97 657 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 KCNJ1P48048 391 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 CRYBA2P53672 197 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 RBBP4Q09028 425 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 ARMCX4Q5H9R4 360 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 NHLRC3Q5JS37 347 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 FAM47EQ6ZV65 393 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 ANKRD46Q86W74 232 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 DZIP1Q86YF9 867 aaKnown RBP3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZBED8Q8IZ13 594 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 OR13C5Q8NGS8 318 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 SETD6Q8TBK2 473 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 KIAA1524Q8TCG1 905 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 GPR148Q8TDV2 347 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 AGAP11Q8TF27 550 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 ERP27Q96DN0 273 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZNF414Q96IQ9 312 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 RCHY1Q96PM5 261 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 RAB3IPQ96QF0 476 aaPredicted RBP3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 RBM24Q9BX46 236 aaKnown RBP3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 AP1M1Q9BXS5 423 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 TMED7Q9Y3B3 224 aa3.42□□□□□ -1.86
RNU4-28P-201ENST00000364739 A0A0B4J203 849 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 SRRM4A7MD48 611 aaKnown RBP3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 FBP2O00757 339 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 P2RX6O15547 441 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 ST8SIA3O43173 380 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 EIF5BO60841 1220 aaKnown RBP3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 GJB2P29033 226 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 FKBP1BP68106 108 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 CETN1Q12798 172 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 CEACAM7Q14002 265 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 POM121L1PQ3SYA9 428 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 MUC21Q5SSG8 566 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 ADCK1Q86TW2 530 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 TIGD4Q8IY51 512 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 KIAA0895Q8NCT3 520 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZNRF1Q8ND25 227 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 OR1B1Q8NGR6 318 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZNF274Q96GC6 653 aaPredicted RBP3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 PINK1Q9BXM7 581 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 MARCH7Q9H992 704 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 THYN1Q9P016 225 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
RNU4-28P-201ENST00000364739 TRAV34A0A0B4J273 112 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 CCDC162PA2VCL2 907 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 TRIM49BA6NDI0 452 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 CTDSPLO15194 276 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 IGHG3P01860 377 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 DUX4L4P0CJ87 422 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 TSPY3P0CV98 308 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms