RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 XGP55808 180 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 SRP54P61011 504 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 GNB1P62873 340 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 PPP1R8Q12972 351 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 HNRNPA0Q13151 305 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 MEF2DQ14814 521 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 CT45A2Q5DJT8 189 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 HERC4Q5GLZ8 1057 aaPredicted RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 PRAMEF7Q5VXH5 474 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 SNRNP48Q6IEG0 339 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 MFSD7Q6UXD7 560 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 RFPL4BQ6ZWI9 263 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 PTAR1Q7Z6K3 402 aaPredicted RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 ADAMTSL2Q86TH1 951 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 HOGA1Q86XE5 327 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 SLC43A2Q8N370 569 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 CCNYQ8ND76 341 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR13C5Q8NGS8 318 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR4A16Q8NH70 328 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 FAM76AQ8TAV0 307 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 MAPK15Q8TD08 544 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 SMAP2Q8WU79 429 aaPredicted RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 CHURC1Q8WUH1 139 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 UBTD2Q8WUN7 234 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF501Q96CX3 271 aaPredicted RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 S1PR3Q99500 378 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 DDX47Q9H0S4 455 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 TRPV6Q9H1D0 765 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 MTIF3Q9H2K0 278 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 DPEP3Q9H4B8 488 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 ACOXLQ9NUZ1 547 aa3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 MRPS2Q9Y399 296 aaKnown RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 MTF2Q9Y483 593 aaPredicted RBP3.25□□□□□ -1.89
RNU6-28P-201ENST00000362378 RNF123Q5XPI4 1314 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 hCG_38984A0A1B0GV85 526 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 CFAP73A6NFT4 308 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 CCSO14618 274 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 B3GALNT1O75752 331 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 STAM2O75886 525 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF432O94892 652 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 REC8O95072 547 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 FGF19O95750 216 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 PGK2P07205 417 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SFTPBP07988 381 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 CCDC192P0DO97 292 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 ETS1P14921 441 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 EDNRAP25101 427 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SFNP31947 248 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 FEN1P39748 380 aaKnown RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 PAX9P55771 341 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 IRX4P78413 519 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 CCZ1BP86790 482 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 CCZ1P86791 482 aaPredicted RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF876PQ49A33 203 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 EPC2Q52LR7 807 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SPANXN4Q5MJ08 99 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 LYPLAL1Q5VWZ2 237 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 FIP1L1Q6UN15 594 aaKnown RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 TMEM64Q6YI46 380 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 Q6ZVQ6 151 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 NLRP14Q86W24 1093 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 DND1Q8IYX4 353 aaKnown RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SLC22A15Q8IZD6 547 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 KDM8Q8N371 416 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 RAB42Q8N4Z0 105 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR6S1Q8NH40 331 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 MRGPRDQ8TDS7 321 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SMPDL3AQ92484 453 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 GLYATL1Q969I3 302 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 NAF1Q96HR8 494 aaKnown RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 GMPPAQ96IJ6 420 aaPredicted RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 GPR137Q96N19 417 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 FAM111AQ96PZ2 611 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SPAG8Q99932 426 aaPredicted RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 FSD1Q9BTV5 496 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 PAPOLGQ9BWT3 736 aaKnown RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 HOXD1Q9GZZ0 328 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 GANQ9H2C0 597 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF665Q9H7R5 613 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 DCLRE1BQ9H816 532 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 GPN1Q9HCN4 374 aaPredicted RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 DDX28Q9NUL7 540 aaKnown RBP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 PLEK2Q9NYT0 353 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF319Q9P2F9 582 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 SPASTQ9UBP0 616 aa3.24□□□□□ -1.89
RNU6-28P-201ENST00000362378 ARHGAP42A6NI28 874 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 HHLA1C9JL84 531 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF195O14628 629 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 CHEK1O14757 476 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 SURF4O15260 269 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 OGTO15294 1046 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 NME2P1O60361 137 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ATP6V1G1O75348 118 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 LRCH4O75427 683 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 TXNDC12O95881 172 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 AMBPP02760 352 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms