RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PRKAB1Q9Y478 270 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 WASHC1A8K0Z3 465 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 H3BQ06 376 aaPredicted RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 ENTPD6O75354 484 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 STATHP02808 62 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 C8GP07360 202 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 RPS19P39019 145 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 UGT2B15P54855 530 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 C22orf39Q6P5X5 142 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 BRAT1Q6PJG6 821 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 WASH2PQ6VEQ5 465 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 ELMOD1Q8N336 334 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 AMER2Q8N7J2 671 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 UCN3Q969E3 161 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 MYDGFQ969H8 173 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 C11orf24Q96F05 449 aaPredicted RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 IL17FQ96PD4 163 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 NEK6Q9HC98 313 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 SNTG1Q9NSN8 517 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 ACER3Q9NUN7 267 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 TBX21Q9UL17 535 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 TBC1D24Q9ULP9 559 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 RUVBL1Q9Y265 456 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 YARS2Q9Y2Z4 477 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 WDR87Q6ZQQ6 2873 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 LOC110117498-PIK3R3F6TDL0 507 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 CHMP24386 653 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 VEGFBP49765 207 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 DMPKQ09013 629 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 BAK1Q16611 211 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 MICAQ29983 383 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 ERICH5Q6P6B1 374 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 TMIGD1Q6UXZ0 262 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 NECTIN4Q96NY8 510 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 VPS35Q96QK1 796 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 CTRCQ99895 268 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 PRRG3Q9BZD7 231 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 AP3M1Q9Y2T2 418 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 ASPMQ8IZT6 3477 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 E9PQ18 207 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 PLK4O00444 970 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 FFAR1O14842 300 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 HAT1O14929 419 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 NME6O75414 186 aaPredicted RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 KLK1P06870 262 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 CLEC2LP0C7M8 214 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 PTNP21246 168 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 LIM2P55344 173 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 TAS2R50P59544 299 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 SEC23BQ15437 767 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 PTCHD4Q6ZW05 846 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 COMMD6Q7Z4G1 85 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 RASGEF1AQ8N9B8 481 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 IL17RDQ8NFM7 739 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 DNAJB8Q8NHS0 232 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 TBC1D20Q96BZ9 403 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 UGT2A1Q9Y4X1 527 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 NEDD8-MDP1E9PL57 170 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 KLHL18O94889 574 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 CBSLP0DN79 551 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 PRPH2P23942 346 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 TNFSF8P32971 234 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 CBSP35520 551 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 CHI3L1P36222 383 aaPredicted RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 C2orf80Q0P641 193 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 VEZF1Q14119 521 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 VEPH1Q14D04 833 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 LRRC26Q2I0M4 334 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 SYTL3Q4VX76 610 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 RNF165Q6ZSG1 346 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 ATCAYQ86WG3 371 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 GALNT13Q8IUC8 556 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 ZNF486Q96H40 463 aaPredicted RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 TXNDC15Q96J42 360 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 BCL7BQ9BQE9 202 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 TTYH2Q9BSA4 534 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 WRAP53Q9BUR4 548 aaKnown RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 NMNAT1Q9HAN9 279 aaPredicted RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 DDX28Q9NUL7 540 aaKnown RBP10.12□□□□□ -0.79
SMC3-201ENST00000361804 PADI2Q9Y2J8 665 aa10.12□□□□□ -0.79
SMC3-201ENST00000361804 SOCS5O75159 536 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 MOSPD3O75425 235 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CTSAP10619 480 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 PCGF2P35227 344 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CAV3P56539 151 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ELAVL2Q12926 359 aaKnown RBP10.11□□□□□ -0.79
SMC3-201ENST00000361804 PUM1Q14671 1186 aaKnown RBP eCLIP10.11□□□□□ -0.793e-7■■■□□ 16.6
SMC3-201ENST00000361804 IFI44LQ53G44 452 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 LYPLAL1Q5VWZ2 237 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 PNCKQ6P2M8 343 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 GLCCI1Q86VQ1 547 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 MINDY2Q8NBR6 621 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CPNE5Q9HCH3 593 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 HCFC1R1Q9NWW0 138 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 IGLV3-16A0A075B6K0 115 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 A0A0G2JN53 185 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms