RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 C11orf24Q96F05 449 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 CCNL2Q96S94 520 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 ZNF717Q9BY31 904 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 PRDM9Q9NQV7 894 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 LYARQ9NX58 379 aaKnown RBP13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 TRPC4Q9UBN4 977 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 DAPP1Q9UN19 280 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 TMED5Q9Y3A6 229 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 MAU2Q9Y6X3 613 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 ACACBO00763 2458 aa13.08□□□□□ -0.32
NSMCE1-201ENST00000361439 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 C4orf51C9J302 202 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 CHST10O43529 356 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 GUCY1B2O75343 617 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 RDH16O75452 317 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 IGHEP01854 428 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 ZGLP1P0C6A0 271 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 SERPINB3P29508 390 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 HTR6P50406 440 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 ACSM2AQ08AH3 577 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 NKG7Q16617 165 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 SMU1Q2TAY7 513 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 BROXQ5VW32 411 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 MLIPQ5VWP3 458 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 ACSM2BQ68CK6 577 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 MRM1Q6IN84 353 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 CYP20A1Q6UW02 462 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 METTL27Q8N6F8 245 aaPredicted RBP13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 ENDOVQ8N8Q3 282 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 PIWIL2Q8TC59 973 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 STT3BQ8TCJ2 826 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 MIEF2Q96C03 454 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 RIC8BQ9NVN3 520 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 PHF11Q9UIL8 331 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 MRPS33Q9Y291 106 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 CCL27Q9Y4X3 112 aa13.07□□□□□ -0.32
NSMCE1-201ENST00000361439 ARHGAP10A1A4S6 786 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TRPC5OSA6NMA1 111 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TMEM233B4DJY2 109 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 SAP18O00422 153 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 HDAC3O15379 428 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 KLK10O43240 276 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 VPS4BO75351 444 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 BMP10O95393 424 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 FHP07954 510 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 LIFP15018 202 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 ACPPP15309 386 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 PCSK2P16519 638 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 CERS1P27544 350 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TLX1P31314 330 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 XCR1P46094 333 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 LIM2P55344 173 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 RAB38P57729 211 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 SNRPNP63162 240 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 SSPNQ14714 243 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TGIF1Q15583 401 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TUBB8Q3ZCM7 444 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 XKR7Q5GH72 579 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 ZNF793Q6ZN11 406 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 Q6ZSR9 355 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 PARP9Q8IXQ6 854 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 DDIASQ8IXT1 998 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 CA13Q8N1Q1 262 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 DTWD1Q8N5C7 304 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 ZSCAN1Q8NBB4 408 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 C19orf60Q96EN9 201 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 VPS50Q96JG6 964 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 PPP3R2Q96LZ3 170 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 IP6K3Q96PC2 410 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 SPSB2Q99619 263 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 MRPL1Q9BYD6 325 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TUBB1Q9H4B7 451 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 CCDC134Q9H6E4 229 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 ZNF395Q9H8N7 513 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 SEMA3GQ9NS98 782 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 C1orf109Q9NX04 203 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 CTSFQ9UBX1 484 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 MCM8Q9UJA3 840 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 FIS1Q9Y3D6 152 aa13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 ANKRD11Q6UB99 2663 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 URB1O60287 2271 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-201ENST00000361439 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 RTCAO00442 366 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 CLDN4O14493 209 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 PIP5K1BO14986 540 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 MYO1DO94832 1006 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 TGDSO95455 350 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 LINC00032P0C843 101 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms